RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 GAGE12FP0CL80 117 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 GAGE12GP0CL81 117 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 GAGE12IP0CL82 117 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 AKR1C3P42330 323 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 UBE2G1P62253 170 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 LGALS9BQ3B8N2 356 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 ALKAL2Q6UX46 152 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 KCNS1Q96KK3 526 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 MDFICQ9P1T7 246 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 MUC4Q99102 2169 aa12.77□□□□□ -0.37
IRF3-216ENST00000597180 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 LTAP01374 205 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 TYMSP04818 313 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
IRF3-216ENST00000597180 LGALS9CQ6DKI2 356 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 C11orf21Q9P2W6 132 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 DNAH1Q9P2D7 4330 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 SACSQ9NZJ4 4579 aa12.76□□□□□ -0.37
IRF3-216ENST00000597180 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
IRF3-216ENST00000597180 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
IRF3-216ENST00000597180 GNRH2O43555 120 aa12.75□□□□□ -0.37
IRF3-216ENST00000597180 SPXQ9BT56 116 aa12.75□□□□□ -0.37
IRF3-216ENST00000597180 F5H768 121 aa12.74□□□□□ -0.37
IRF3-216ENST00000597180 LY6G6CO95867 125 aa12.74□□□□□ -0.37
IRF3-216ENST00000597180 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
IRF3-216ENST00000597180 C11orf52Q96A22 123 aa12.74□□□□□ -0.37
IRF3-216ENST00000597180 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
IRF3-216ENST00000597180 FABP5P3A8MUU1 101 aa12.73□□□□□ -0.37
IRF3-216ENST00000597180 IFNA1P01562 189 aa12.73□□□□□ -0.37
IRF3-216ENST00000597180 BLOC1S1P78537 153 aa12.73□□□□□ -0.37
IRF3-216ENST00000597180 MRPL16Q9NX20 251 aaKnown RBP12.73□□□□□ -0.37
IRF3-216ENST00000597180 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
IRF3-216ENST00000597180 BCL2P10415 239 aa12.72□□□□□ -0.37
IRF3-216ENST00000597180 CRIP1P50238 77 aa12.72□□□□□ -0.37
IRF3-216ENST00000597180 MEF2BQ02080 365 aaPredicted RBP12.72□□□□□ -0.37
IRF3-216ENST00000597180 LYPD6BQ8NI32 183 aa12.72□□□□□ -0.37
IRF3-216ENST00000597180 HOXA5P20719 270 aa12.71□□□□□ -0.37
IRF3-216ENST00000597180 TAGLN2P37802 199 aaKnown RBP12.71□□□□□ -0.37
IRF3-216ENST00000597180 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
IRF3-216ENST00000597180 RASL10AQ92737 203 aa12.71□□□□□ -0.37
IRF3-216ENST00000597180 NACAE9PAV3 2078 aa12.71□□□□□ -0.38
IRF3-216ENST00000597180 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
IRF3-216ENST00000597180 SH2D1AO60880 128 aa12.7□□□□□ -0.38
IRF3-216ENST00000597180 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
IRF3-216ENST00000597180 FAM162BQ5T6X4 162 aa12.7□□□□□ -0.38
IRF3-216ENST00000597180 MLST8Q9BVC4 326 aa12.7□□□□□ -0.38
IRF3-216ENST00000597180 VAX2Q9UIW0 290 aa12.7□□□□□ -0.38
IRF3-216ENST00000597180 M0R2P5 195 aa12.69□□□□□ -0.38
IRF3-216ENST00000597180 PDE6DO43924 150 aa12.69□□□□□ -0.38
IRF3-216ENST00000597180 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
IRF3-216ENST00000597180 C9orf85Q96MD7 179 aa12.69□□□□□ -0.38
IRF3-216ENST00000597180 P0DMU3 169 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 RNASE3P12724 160 aaKnown RBP12.68□□□□□ -0.38
IRF3-216ENST00000597180 OR5I1Q13606 314 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 BAGE2Q86Y30 109 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
IRF3-216ENST00000597180 KRBOX1C9JBD0 128 aa12.67□□□□□ -0.38
IRF3-216ENST00000597180 RYR3Q15413 4870 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 B4DEV8 164 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 H3BNG1 76 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 ORM1P02763 201 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 PTH2Q96A98 100 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 RYR2Q92736 4967 aa12.66□□□□□ -0.38
IRF3-216ENST00000597180 POM121L12Q8N7R1 296 aa12.65□□□□□ -0.38
IRF3-216ENST00000597180 VPS13DQ5THJ4 4388 aa12.65□□□□□ -0.39
IRF3-216ENST00000597180 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 M0R036 132 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 IGHV3-53P01767 116 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 ASIPP42127 132 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 FHL2Q14192 279 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 ZNF575Q86XF7 245 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 MED9Q9NWA0 146 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
IRF3-216ENST00000597180 A0A0J9YY99 117 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 NUDT3O95989 172 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 IGLV2-8P01709 118 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 ZNF876PQ49A33 203 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 TEX261Q6UWH6 196 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 VSIG2Q96IQ7 327 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 ZNF479Q96JC4 524 aa12.63□□□□□ -0.39
IRF3-216ENST00000597180 RAB19A4D1S5 217 aa12.62□□□□□ -0.39
IRF3-216ENST00000597180 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
IRF3-216ENST00000597180 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
IRF3-216ENST00000597180 SLAQ13239 276 aa12.62□□□□□ -0.39
IRF3-216ENST00000597180 RNF212Q495C1 297 aa12.62□□□□□ -0.39
IRF3-216ENST00000597180 PRO0255Q9UI72 69 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms