RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
SHKBP1-205ENST00000594973 PRNTQ86SH4 94 aa13.17□□□□□ -0.3
SHKBP1-205ENST00000594973 MAPK1IP1LQ8NDC0 245 aa13.17□□□□□ -0.3
SHKBP1-205ENST00000594973 ASCL2Q99929 193 aa13.17□□□□□ -0.3
SHKBP1-205ENST00000594973 HLA-DRB4X5D2U9 266 aa13.17□□□□□ -0.3
SHKBP1-205ENST00000594973 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 GAGE13Q4V321 117 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 CLEC19AQ6UXS0 136 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 SH2D6Q7Z4S9 175 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 ZNF479Q96JC4 524 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 CYSLTR1Q9Y271 337 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 M0R3E3 92 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 TAL2Q16559 108 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 NHP2Q9NX24 153 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 PRO0461Q9UI25 63 aa13.16□□□□□ -0.3
SHKBP1-205ENST00000594973 K7ERJ3 54 aa13.15□□□□□ -0.3
SHKBP1-205ENST00000594973 CIARTQ8N365 385 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-205ENST00000594973 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
SHKBP1-205ENST00000594973 PRELID3AQ96N28 172 aa13.15□□□□□ -0.3
SHKBP1-205ENST00000594973 ZMAT4Q9H898 229 aa13.15□□□□□ -0.3
SHKBP1-205ENST00000594973 NBPF19A0A087WUL8 3843 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 TRAV41A0A0B4J266 112 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 TCTAP57738 103 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 DSCR9P59020 149 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 C8orf86Q6ZUL3 223 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 ATP6V0E2Q8NHE4 81 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 ORMDL3Q8N138 153 aa13.14□□□□□ -0.31
SHKBP1-205ENST00000594973 D6R8Y8 96 aa13.13□□□□□ -0.31
SHKBP1-205ENST00000594973 H3BMG7 143 aa13.13□□□□□ -0.31
SHKBP1-205ENST00000594973 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
SHKBP1-205ENST00000594973 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
SHKBP1-205ENST00000594973 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
SHKBP1-205ENST00000594973 CHD6Q8TD26 2715 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 TRBV25-1A0A075B6N4 114 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 KRTAP10-9P60411 292 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 ATP5G2Q06055 141 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 LINC01559Q495D7 138 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 FAM104BQ5XKR9 115 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 SLC25A16P16260 332 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 EVI2AP22794 236 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 HHLA3Q9XRX5 114 aa13.12□□□□□ -0.31
SHKBP1-205ENST00000594973 IGHV3OR16-13A0A075B7E8 117 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 IGHV3-74A0A0B4J1X5 117 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 IGKV2D-26A0A0A0MRZ7 120 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 BLCAPP62952 87 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 PDE6HQ13956 83 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 KLK9Q2XQG4 91 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 KLK9Q9UKQ9 250 aa13.11□□□□□ -0.31
SHKBP1-205ENST00000594973 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 CDIP1Q9H305 208 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 A6NDX4 124 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 TRGV3P03979 118 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 FOXI1Q12951 378 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 LINC01356Q8N9X3 169 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
SHKBP1-205ENST00000594973 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 APOMO95445 188 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 TGFAP01135 160 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 ODF1Q14990 250 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 Q6ZS46 218 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 MXRA5Q9NR99 2828 aa13.09□□□□□ -0.31
SHKBP1-205ENST00000594973 LINC01546A6NGU7 62 aa13.08□□□□□ -0.31
SHKBP1-205ENST00000594973 INSL3P51460 131 aa13.08□□□□□ -0.31
SHKBP1-205ENST00000594973 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.31
SHKBP1-205ENST00000594973 C20orf78Q9BR46 151 aa13.08□□□□□ -0.31
SHKBP1-205ENST00000594973 APCP25054 2843 aa13.08□□□□□ -0.32
SHKBP1-205ENST00000594973 A0A1B0GWB2 263 aa13.08□□□□□ -0.32
SHKBP1-205ENST00000594973 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
SHKBP1-205ENST00000594973 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 A0A096LNT2 108 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 CLPSL1A2RUU4 121 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 IGKCP01834 107 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 GATA3P23771 443 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 HLA-DMBP28068 263 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 BUB3O43684 328 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 IGF1P05019 195 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 MRPL51Q4U2R6 128 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 SYT8Q8NBV8 401 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 VCX2Q9H322 139 aa13.07□□□□□ -0.32
SHKBP1-205ENST00000594973 CREBBPQ92793 2442 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms