RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 UBE2SQ16763 222 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 C22orf39Q6P5X5 142 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 FOXI2Q6ZQN5 318 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 TMEM183AQ8IXX5 376 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 C5orf17Q8NAS9 161 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 ZFP62Q8NB50 900 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-216ENST00000593223 OR4K13Q8NH42 304 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 DCANP1Q8TF63 244 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 NAT14Q8WUY8 206 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 COPS9Q8WXC6 57 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 ADAT1Q9BUB4 502 aaKnown RBP3.13□□□□□ -1.91
SMAD4-216ENST00000593223 DERL1Q9BUN8 251 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 BANF2Q9H503 90 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 ZNF286AQ9HBT8 521 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 MED9Q9NWA0 146 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 KLK5Q9Y337 293 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-216ENST00000593223 RNF11Q9Y3C5 154 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 DSPPQ9NZW4 1301 aa3.13□□□□□ -1.91
SMAD4-216ENST00000593223 MYH11P35749 1972 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 ZNF860A6NHJ4 632 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 A8MWL6 223 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 NDUFB2O95178 105 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 MPC2O95563 127 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 IGLV2-23P01705 113 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 CD14P08571 375 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 CXCL5P42830 114 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 AKR1C2P52895 323 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 UBE2BP63146 152 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 HES1Q14469 280 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 PYY3Q5JQD4 70 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 AADACL3Q5VUY0 350 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 Q6P435 159 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 IZUMO2Q6UXV1 221 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 ATOH7Q8N100 152 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 TTC9CQ8N5M4 171 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 TEX29Q8N6K0 151 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 CIB3Q96Q77 187 aaPredicted RBP3.12□□□□□ -1.91
SMAD4-216ENST00000593223 GINS4Q9BRT9 223 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 CHAC1Q9BUX1 264 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 KLK12Q9UKR0 248 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 CMYA5Q8N3K9 4069 aa3.12□□□□□ -1.91
SMAD4-216ENST00000593223 MYH9P35579 1960 aaKnown RBP3.11□□□□□ -1.91
SMAD4-216ENST00000593223 IGKV1D-43A0A0B4J1Z2 117 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 IGHV7-4-1A0A0J9YVY3 117 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 TRBV27A0A0K0K1C4 114 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 FAM236AA0A1B0GUQ0 79 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 FAM236BA0A1B0GV22 79 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 OR51F1A6NGY5 319 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 C10orf142B7Z368 130 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 SOCS1O15524 211 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 INSP01308 110 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 CISD3P0C7P0 127 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 PYYP10082 97 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 ZNF136P52737 540 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 HBBP68871 147 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 OR5D16Q8NGK9 328 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 OR4A5Q8NH83 315 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 DPH3Q96FX2 82 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 NAA38Q9BRA0 125 aaKnown RBP3.11□□□□□ -1.91
SMAD4-216ENST00000593223 FGF23Q9GZV9 251 aaPredicted RBP3.11□□□□□ -1.91
SMAD4-216ENST00000593223 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 IL36BQ9NZH7 164 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 TP73-AS1Q9UF72 201 aa3.11□□□□□ -1.91
SMAD4-216ENST00000593223 DYNC2H1Q8NCM8 4307 aaKnown RBP3.11□□□□□ -1.91
SMAD4-216ENST00000593223 NACAE9PAV3 2078 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 IGKV1-6A0A0C4DH72 117 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 A0A0D9SEW6 157 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 TMEM256-PLSCR3K7ERE1 68 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 UQCRQO14949 82 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 IGKV1-39P01597 117 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 C1QAP02745 245 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 IGKV1D-39P04432 117 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 SPINK8P0C7L1 97 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 ZNF688P0C7X2 276 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 INAFM2P0DMQ5 153 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 HLA-DRB4P13762 266 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 CSN1S1P47710 185 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 UBE2AP49459 152 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 HIST1H4AP62805 103 aaKnown RBP3.1□□□□□ -1.91
SMAD4-216ENST00000593223 RPL30P62888 115 aaKnown RBP3.1□□□□□ -1.91
SMAD4-216ENST00000593223 CATR1Q13166 79 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 DIAPH2-AS1Q14236 149 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 DEFB133Q30KQ1 61 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 SP6Q3SY56 376 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 LINC01545Q5VT33 79 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 RNF182Q8N6D2 247 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 MCEEQ96PE7 176 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 CHCHD7Q9BUK0 85 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 SLC39A9Q9NUM3 307 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 HLA-DRB4X5D2U9 266 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 CNTRLQ7Z7A1 2325 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 PCM1Q15154 2024 aa3.1□□□□□ -1.91
SMAD4-216ENST00000593223 ARHGAP21Q5T5U3 1957 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.91
SMAD4-216ENST00000593223 IGLV3-16A0A075B6K0 115 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 TRBV6-6A0A0A6YYG2 114 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 IGHV3-43A0A0B4J1X8 118 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms