RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 FRMD6-AS1P0C7T7 363 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 HLA-DRB4P13762 266 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 CD33P20138 364 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 CMC4P56277 68 aaPredicted RBP8.97□□□□□ -0.97
CCBE1-203ENST00000589116 RAB4BP61018 213 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 FER1L6-AS1Q8NA97 138 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 HLA-DRB4X5D2U9 266 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 WNK1Q9H4A3 2382 aa8.96□□□□□ -0.97
CCBE1-203ENST00000589116 PKD1L1Q8TDX9 2849 aa8.96□□□□□ -0.98
CCBE1-203ENST00000589116 C11orf21Q9P2W6 132 aa8.96□□□□□ -0.98
CCBE1-203ENST00000589116 C5orf52A6NGY3 159 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 F2Z2F3 143 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 ARMS2P0C7Q2 107 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
CCBE1-203ENST00000589116 CDKN1BP46527 198 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 CAMPP49913 170 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 DEFA6Q01524 100 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 LYZL1Q6UWQ5 148 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 ZNF575Q86XF7 245 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 GATD1Q8NB37 220 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 CLUHP3Q96NS8 147 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 CNFNQ9BYD5 112 aa8.95□□□□□ -0.98
CCBE1-203ENST00000589116 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 C7orf71A4D174 169 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 H3BMM0 161 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 J3KRW8 73 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 APCSP02743 223 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 AMTNQ6UX39 209 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 FAM110AQ9BQ89 295 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 TPPP3Q9BW30 176 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 GRIFINA4D1Z8 144 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 KNCNA6PVL3 124 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 INSL3P51460 131 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 NDUFA6P56556 154 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 SNRPEP62304 92 aaKnown RBP8.94□□□□□ -0.98
CCBE1-203ENST00000589116 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
CCBE1-203ENST00000589116 OR11H12B2RN74 326 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 UBE2CO00762 179 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 MED14OSP0DP75 135 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 SLAQ13239 276 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 COA6Q5JTJ3 125 aaKnown RBP8.93□□□□□ -0.98
CCBE1-203ENST00000589116 DNLZQ5SXM8 178 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 ZNF493Q6ZR52 646 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 C3orf56Q8N813 242 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
CCBE1-203ENST00000589116 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
CCBE1-203ENST00000589116 SNAI2O43623 268 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 SPINK13Q1W4C9 94 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 GFI1BQ5VTD9 330 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 Q6ZQT7 251 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 NAGKQ9UJ70 344 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 SORL1Q92673 2214 aa8.92□□□□□ -0.98
CCBE1-203ENST00000589116 AGRNO00468 2067 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 M0R2Z0 102 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 ZNF324O75467 553 aaPredicted RBP8.91□□□□□ -0.98
CCBE1-203ENST00000589116 HOXA5P20719 270 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 ASIPP42127 132 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 BEAN1Q3B7T3 259 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 TDRG1Q3Y452 100 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 FAM159AQ6UWV7 190 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 TRAV12-3A0A0B4J271 114 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 CACNG7P62955 275 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 C9orf66Q5T8R8 295 aa8.91□□□□□ -0.98
CCBE1-203ENST00000589116 IGHV4-4A0A075B6R2 117 aa8.9□□□□□ -0.98
CCBE1-203ENST00000589116 AMBPP02760 352 aa8.9□□□□□ -0.98
CCBE1-203ENST00000589116 S100A4P26447 101 aaKnown RBP8.9□□□□□ -0.98
CCBE1-203ENST00000589116 Q0VG73 95 aa8.9□□□□□ -0.98
CCBE1-203ENST00000589116 ZNF124Q15973 351 aa8.9□□□□□ -0.98
CCBE1-203ENST00000589116 OR10J3Q5JRS4 329 aa8.9□□□□□ -0.98
CCBE1-203ENST00000589116 MUC21Q5SSG8 566 aa8.9□□□□□ -0.98
CCBE1-203ENST00000589116 TRAV12-2A0A075B6T6 113 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 RBMY1BA6NDE4 496 aaKnown RBP8.89□□□□□ -0.99
CCBE1-203ENST00000589116 RBMY1EA6NEQ0 496 aaKnown RBP8.89□□□□□ -0.99
CCBE1-203ENST00000589116 H3BVH4 76 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 RBMY1DP0C7P1 496 aaKnown RBP8.89□□□□□ -0.99
CCBE1-203ENST00000589116 NTF3P20783 257 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 SRIP30626 198 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 TWIST1Q15672 202 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 STHQ8IWL8 128 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 C20orf144Q9BQM9 153 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 MCRIP2Q9BUT9 160 aaKnown RBP8.89□□□□□ -0.99
CCBE1-203ENST00000589116 TMEM191AQ9H0A3 160 aa8.89□□□□□ -0.99
CCBE1-203ENST00000589116 IGHV1OR15-1A0A075B7D0 117 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 LOC102724200A0A096LPH7 203 aaPredicted RBP8.88□□□□□ -0.99
CCBE1-203ENST00000589116 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
CCBE1-203ENST00000589116 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
CCBE1-203ENST00000589116 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 SCRT2Q9NQ03 307 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 SPANXN1Q5VSR9 72 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 HIST3H2BBQ8N257 126 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 OR10AG1Q8NH19 301 aa8.88□□□□□ -0.99
CCBE1-203ENST00000589116 ALKBH7Q9BT30 221 aaPredicted RBP8.88□□□□□ -0.99
CCBE1-203ENST00000589116 MUC21A0A0G2JKD1 596 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms