RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 NAGKQ9UJ70 344 aa12.3□□□□□ -0.44
NFIX-210ENST00000588228 LOC102724200A0A096LPH7 203 aaPredicted RBP12.29□□□□□ -0.44
NFIX-210ENST00000588228 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 NTF3P20783 257 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 TSPOP30536 169 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 HIVEP1P15822 2718 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 C7orf71A4D174 169 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 SNAI2O43623 268 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 ESDP10768 282 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 HLA-DRB4P13762 266 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 FABP4P15090 132 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 TWIST1Q15672 202 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 MAP6D1Q9H9H5 199 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
NFIX-210ENST00000588228 HLA-DRB4X5D2U9 266 aa12.29□□□□□ -0.44
NFIX-210ENST00000588228 MUC21A0A0G2JKD1 596 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 MUC21A0A140T8X8 626 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 A8MTW9 85 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 SERF1AO75920 110 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 AMBPP02760 352 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 CDKN1BP46527 198 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 LINC00310P59036 64 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 ANXA2RQ3ZCQ2 193 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 PRR31Q5SQ13 230 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 C18orf32Q8TCD1 76 aa12.28□□□□□ -0.44
NFIX-210ENST00000588228 KNCNA6PVL3 124 aa12.27□□□□□ -0.45
NFIX-210ENST00000588228 SSTP61278 116 aa12.27□□□□□ -0.45
NFIX-210ENST00000588228 AMTNQ6UX39 209 aa12.27□□□□□ -0.45
NFIX-210ENST00000588228 LINC00518Q8N0U6 118 aa12.27□□□□□ -0.45
NFIX-210ENST00000588228 TMEM18Q96B42 140 aa12.27□□□□□ -0.45
NFIX-210ENST00000588228 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
NFIX-210ENST00000588228 H3BMM0 161 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 NUPR1O60356 82 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 MED14OSP0DP75 135 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 ASIPP42127 132 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 CACNG7P62955 275 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 DNLZQ5SXM8 178 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 FAM104BQ5XKR9 115 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 OR10D4PQ8NGN7 298 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 PACRGQ96M98 296 aaPredicted RBP12.26□□□□□ -0.45
NFIX-210ENST00000588228 TMEM191AQ9H0A3 160 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 SAP30O75446 220 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
NFIX-210ENST00000588228 SMIM6P0DI80 62 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
NFIX-210ENST00000588228 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
NFIX-210ENST00000588228 TRAV12-3A0A0B4J271 114 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 H3BVH4 76 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 M0R2Z0 102 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 S100A4P26447 101 aaKnown RBP12.25□□□□□ -0.45
NFIX-210ENST00000588228 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
NFIX-210ENST00000588228 IQCJQ1A5X6 159 aa12.24□□□□□ -0.45
NFIX-210ENST00000588228 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
NFIX-210ENST00000588228 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
NFIX-210ENST00000588228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.24□□□□□ -0.45
NFIX-210ENST00000588228 RCHY1Q96PM5 261 aa12.24□□□□□ -0.45
NFIX-210ENST00000588228 MSRB1Q9NZV6 116 aa12.24□□□□□ -0.45
NFIX-210ENST00000588228 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
NFIX-210ENST00000588228 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
NFIX-210ENST00000588228 PF4P02776 101 aa12.23□□□□□ -0.45
NFIX-210ENST00000588228 TDRG1Q3Y452 100 aa12.23□□□□□ -0.45
NFIX-210ENST00000588228 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
NFIX-210ENST00000588228 GNRH2O43555 120 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 ZNF124Q15973 351 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 ODF3L2Q3SX64 289 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 U3KQK5 164 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 CMC4P56277 68 aaPredicted RBP12.22□□□□□ -0.45
NFIX-210ENST00000588228 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 LINC00482Q8N8I6 264 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 C12orf57Q99622 126 aa12.22□□□□□ -0.45
NFIX-210ENST00000588228 RBMY1BA6NDE4 496 aaKnown RBP12.21□□□□□ -0.45
NFIX-210ENST00000588228 RBMY1EA6NEQ0 496 aaKnown RBP12.21□□□□□ -0.45
NFIX-210ENST00000588228 RBMY1DP0C7P1 496 aaKnown RBP12.21□□□□□ -0.45
NFIX-210ENST00000588228 RNASE3P12724 160 aaKnown RBP12.21□□□□□ -0.45
NFIX-210ENST00000588228 MRPL51Q4U2R6 128 aaKnown RBP12.21□□□□□ -0.45
NFIX-210ENST00000588228 TIMM8BQ9Y5J9 83 aaPredicted RBP12.21□□□□□ -0.45
NFIX-210ENST00000588228 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
NFIX-210ENST00000588228 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
NFIX-210ENST00000588228 RNF185Q96GF1 192 aa12.2□□□□□ -0.46
NFIX-210ENST00000588228 SAMD10Q9BYL1 202 aa12.2□□□□□ -0.46
NFIX-210ENST00000588228 PHLDA3Q9Y5J5 127 aa12.2□□□□□ -0.46
NFIX-210ENST00000588228 IGHV1OR15-1A0A075B7D0 117 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 CYSRT1A8MQ03 144 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 D6R8Y8 96 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
NFIX-210ENST00000588228 CD7P09564 240 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 RAB4AP20338 218 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 FXYD7P58549 80 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 PYY3Q5JQD4 70 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 NIT1Q86X76 327 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 CITED1Q99966 193 aa12.19□□□□□ -0.46
NFIX-210ENST00000588228 FAM110AQ9BQ89 295 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms