RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 IGHG2P01859 326 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 DEFB125Q8N687 156 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 Q8TAT8 98 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 FAM110DQ8TAY7 271 aaPredicted RBP11.18□□□□□ -0.62
CCDC43-203ENST00000588210 VGLL1Q99990 258 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 A0A087X0K7 114 aa11.17□□□□□ -0.62
CCDC43-203ENST00000588210 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
CCDC43-203ENST00000588210 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
CCDC43-203ENST00000588210 LGALS9BQ3B8N2 356 aa11.17□□□□□ -0.62
CCDC43-203ENST00000588210 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
CCDC43-203ENST00000588210 LOC389332A0A1B0GUA5 103 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 HBDP02042 147 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 RAB9AP51151 201 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 TMEM95Q3KNT9 176 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 CBY1Q9Y3M2 126 aa11.16□□□□□ -0.62
CCDC43-203ENST00000588210 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
CCDC43-203ENST00000588210 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
CCDC43-203ENST00000588210 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
CCDC43-203ENST00000588210 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
CCDC43-203ENST00000588210 OR8A1Q8NGG7 326 aa11.15□□□□□ -0.62
CCDC43-203ENST00000588210 ANK2Q01484 3957 aa11.15□□□□□ -0.62
CCDC43-203ENST00000588210 GPR183P32249 361 aa11.15□□□□□ -0.63
CCDC43-203ENST00000588210 CKS2P33552 79 aa11.15□□□□□ -0.63
CCDC43-203ENST00000588210 RHOGP84095 191 aa11.15□□□□□ -0.63
CCDC43-203ENST00000588210 TWIST1Q15672 202 aa11.15□□□□□ -0.63
CCDC43-203ENST00000588210 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.63
CCDC43-203ENST00000588210 CITED1Q99966 193 aa11.15□□□□□ -0.63
CCDC43-203ENST00000588210 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
CCDC43-203ENST00000588210 NPYP01303 97 aa11.14□□□□□ -0.63
CCDC43-203ENST00000588210 KRTAP10-3P60369 221 aa11.14□□□□□ -0.63
CCDC43-203ENST00000588210 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
CCDC43-203ENST00000588210 K7EP13 123 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 FGF6P10767 208 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 LINC01559Q495D7 138 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 LINC01546A6NGU7 62 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 BUB3O43684 328 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 PPBPP02775 128 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 VAMP3Q15836 100 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 SLC50A1Q9BRV3 221 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 ZNF580Q9UK33 172 aa11.13□□□□□ -0.63
CCDC43-203ENST00000588210 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 IGF1P05019 195 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 CACNG7P62955 275 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 ATP6V0E1O15342 81 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 ORM1P02763 201 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 OR4C5Q8NGB2 326 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
CCDC43-203ENST00000588210 TENM1Q9UKZ4 2725 aa11.11□□□□□ -0.63
CCDC43-203ENST00000588210 IGHV3OR16-8A0A075B7F1 116 aa11.11□□□□□ -0.63
CCDC43-203ENST00000588210 PRAC2D3DTV9 90 aa11.11□□□□□ -0.63
CCDC43-203ENST00000588210 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
CCDC43-203ENST00000588210 LINC00527Q9UJ94 153 aa11.11□□□□□ -0.63
CCDC43-203ENST00000588210 IGHV3-35A0A0C4DH35 117 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 ERCC8Q13216 396 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 CCDC140Q96MF4 163 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 CLEC3BP05452 202 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 SEC11AP67812 179 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 FOXE3Q13461 319 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 TMEM97Q5BJF2 176 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 BOD1L2Q8IYS8 172 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
CCDC43-203ENST00000588210 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
CCDC43-203ENST00000588210 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
CCDC43-203ENST00000588210 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
CCDC43-203ENST00000588210 CD28P10747 220 aa11.08□□□□□ -0.63
CCDC43-203ENST00000588210 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.63
CCDC43-203ENST00000588210 FXYD7P58549 80 aa11.08□□□□□ -0.63
CCDC43-203ENST00000588210 RNF182Q8N6D2 247 aa11.08□□□□□ -0.63
CCDC43-203ENST00000588210 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.63
CCDC43-203ENST00000588210 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.63
CCDC43-203ENST00000588210 CBY3A6NI87 242 aa11.08□□□□□ -0.64
CCDC43-203ENST00000588210 C10orf99Q6UWK7 81 aa11.08□□□□□ -0.64
CCDC43-203ENST00000588210 ERASQ7Z444 233 aa11.08□□□□□ -0.64
CCDC43-203ENST00000588210 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
CCDC43-203ENST00000588210 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
CCDC43-203ENST00000588210 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 SIVA1O15304 175 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 SNAI2O43623 268 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 CFHR3Q02985 330 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
CCDC43-203ENST00000588210 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms