RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 F2Z2F3 143 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 SAP30O75446 220 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 LEPP41159 167 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 PDZD11Q5EBL8 140 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 MUC21Q5SSG8 566 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.76□□□□□ -0.05
TRIM47-204ENST00000587339 ZNF256Q9Y2P7 627 aaPredicted RBP14.76□□□□□ -0.05
TRIM47-204ENST00000587339 SRIP30626 198 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 PRR31Q5SQ13 230 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 HIST3H2BBQ8N257 126 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 MAP6D1Q9H9H5 199 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 C12orf57Q99622 126 aa14.75□□□□□ -0.05
TRIM47-204ENST00000587339 PF4P02776 101 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 TSPOP30536 169 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 CDKN1BP46527 198 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 CNFNQ9BYD5 112 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 KNCNA6PVL3 124 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 HLA-DRB4P13762 266 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 NTF3P20783 257 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 S100A2P29034 98 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 TWIST1Q15672 202 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 GATD1Q8NB37 220 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 HLA-DRB4X5D2U9 266 aa14.74□□□□□ -0.05
TRIM47-204ENST00000587339 M0R2Z0 102 aa14.73□□□□□ -0.05
TRIM47-204ENST00000587339 ANXA2RQ3ZCQ2 193 aa14.73□□□□□ -0.05
TRIM47-204ENST00000587339 C7orf71A4D174 169 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 IFITM10A6NMD0 228 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 Q0VG73 95 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 ZNF124Q15973 351 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 SPINK13Q1W4C9 94 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 ZNF493Q6ZR52 646 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 SORL1Q92673 2214 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 NIPBLQ6KC79 2804 aaeCLIP14.72□□□□□ -0.05
TRIM47-204ENST00000587339 TRAV12-3A0A0B4J271 114 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 H3BMM0 161 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 OR10J3Q5JRS4 329 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 AMTNQ6UX39 209 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 BAGE3Q86Y29 109 aa14.72□□□□□ -0.05
TRIM47-204ENST00000587339 TRAV12-2A0A075B6T6 113 aa14.71□□□□□ -0.05
TRIM47-204ENST00000587339 LOC102724200A0A096LPH7 203 aaPredicted RBP14.71□□□□□ -0.05
TRIM47-204ENST00000587339 CYSRT1A8MQ03 144 aa14.71□□□□□ -0.05
TRIM47-204ENST00000587339 FAM159AQ6UWV7 190 aa14.71□□□□□ -0.05
TRIM47-204ENST00000587339 TMEM256Q8N2U0 113 aa14.71□□□□□ -0.05
TRIM47-204ENST00000587339 ALKBH7Q9BT30 221 aaPredicted RBP14.71□□□□□ -0.05
TRIM47-204ENST00000587339 IGLV1-51P01701 117 aa14.7□□□□□ -0.06
TRIM47-204ENST00000587339 OR5AL1P0C617 328 aa14.7□□□□□ -0.06
TRIM47-204ENST00000587339 TP53TG3Q9ULZ0 132 aa14.7□□□□□ -0.06
TRIM47-204ENST00000587339 H3BVH4 76 aa14.7□□□□□ -0.06
TRIM47-204ENST00000587339 ZNF324O75467 553 aaPredicted RBP14.7□□□□□ -0.06
TRIM47-204ENST00000587339 S100A4P26447 101 aaKnown RBP14.7□□□□□ -0.06
TRIM47-204ENST00000587339 ASIPP42127 132 aa14.7□□□□□ -0.06
TRIM47-204ENST00000587339 SNAI2O43623 268 aa14.69□□□□□ -0.06
TRIM47-204ENST00000587339 FABP4P15090 132 aa14.69□□□□□ -0.06
TRIM47-204ENST00000587339 ODF3L2Q3SX64 289 aa14.69□□□□□ -0.06
TRIM47-204ENST00000587339 LINC00482Q8N8I6 264 aa14.69□□□□□ -0.06
TRIM47-204ENST00000587339 OR10AG1Q8NH19 301 aa14.69□□□□□ -0.06
TRIM47-204ENST00000587339 MSRB1Q9NZV6 116 aa14.69□□□□□ -0.06
TRIM47-204ENST00000587339 A8MTW9 85 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 C18orf32Q8TCD1 76 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 KCNS1Q96KK3 526 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 HIST1H2BLQ99880 126 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 AGRNO00468 2067 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 GNRH2O43555 120 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 SERF1AO75920 110 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 CITED1Q99966 193 aa14.68□□□□□ -0.06
TRIM47-204ENST00000587339 TIMM8BQ9Y5J9 83 aaPredicted RBP14.68□□□□□ -0.06
TRIM47-204ENST00000587339 OR11H12B2RN74 326 aa14.67□□□□□ -0.06
TRIM47-204ENST00000587339 SPANXN1Q5VSR9 72 aa14.67□□□□□ -0.06
TRIM47-204ENST00000587339 OR2K2Q8NGT1 345 aa14.67□□□□□ -0.06
TRIM47-204ENST00000587339 ZMAT5Q9UDW3 170 aaKnown RBP14.67□□□□□ -0.06
TRIM47-204ENST00000587339 JMJD1CQ15652 2540 aa14.67□□□□□ -0.06
TRIM47-204ENST00000587339 NUPR1O60356 82 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 FAM104BQ5XKR9 115 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 AMN1Q8IY45 258 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 TMEM191AQ9H0A3 160 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 FXYD7P58549 80 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 LINC00310P59036 64 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 CACNG7P62955 275 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 TDRG1Q3Y452 100 aa14.66□□□□□ -0.06
TRIM47-204ENST00000587339 IGHV4-4A0A075B6R2 117 aa14.65□□□□□ -0.06
TRIM47-204ENST00000587339 RBMY1BA6NDE4 496 aaKnown RBP14.65□□□□□ -0.06
TRIM47-204ENST00000587339 RBMY1EA6NEQ0 496 aaKnown RBP14.65□□□□□ -0.06
TRIM47-204ENST00000587339 AMBPP02760 352 aa14.65□□□□□ -0.06
TRIM47-204ENST00000587339 RBMY1DP0C7P1 496 aaKnown RBP14.65□□□□□ -0.06
TRIM47-204ENST00000587339 MED14OSP0DP75 135 aa14.65□□□□□ -0.06
TRIM47-204ENST00000587339 IQCJQ1A5X6 159 aa14.65□□□□□ -0.06
TRIM47-204ENST00000587339 DNLZQ5SXM8 178 aa14.65□□□□□ -0.06
TRIM47-204ENST00000587339 LURAP1LQ8IV03 231 aa14.65□□□□□ -0.06
TRIM47-204ENST00000587339 CD7P09564 240 aa14.64□□□□□ -0.07
TRIM47-204ENST00000587339 OR10D4PQ8NGN7 298 aa14.64□□□□□ -0.07
TRIM47-204ENST00000587339 TMEM18Q96B42 140 aa14.64□□□□□ -0.07
TRIM47-204ENST00000587339 PACRGQ96M98 296 aaPredicted RBP14.64□□□□□ -0.07
TRIM47-204ENST00000587339 RCHY1Q96PM5 261 aa14.64□□□□□ -0.07
TRIM47-204ENST00000587339 PHLDA3Q9Y5J5 127 aa14.64□□□□□ -0.07
TRIM47-204ENST00000587339 ESDP10768 282 aa14.64□□□□□ -0.07
TRIM47-204ENST00000587339 RNASE3P12724 160 aaKnown RBP14.64□□□□□ -0.07
TRIM47-204ENST00000587339 CMC4P56277 68 aaPredicted RBP14.64□□□□□ -0.07
TRIM47-204ENST00000587339 CRXO43186 299 aaPredicted RBP14.63□□□□□ -0.07
TRIM47-204ENST00000587339 STHQ8IWL8 128 aa14.63□□□□□ -0.07
TRIM47-204ENST00000587339 SCRT2Q9NQ03 307 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms