RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 LGALS9O00182 355 aa9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 IGHV3-43DP0DP04 118 aa9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 ADORA2A-AS1P86434 159 aa9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 LINC00322Q6ZN03 302 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 USP9XQ93008 2570 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-232ENST00000584168 OOEPA6NGQ2 149 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 PAX8Q06710 450 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 DSCR8Q96T75 97 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 VKORC1Q9BQB6 163 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 CHD6Q8TD26 2715 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 TEX49A0A1B0GTD5 131 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 MYCNOSP40205 109 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 TWIST1Q15672 202 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 ATP5G1P05496 136 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-232ENST00000584168 PLAUP00749 431 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 PRSS1P07477 247 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 BSPH1Q075Z2 132 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FAM236DA0A1B0GTK5 79 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 A0A1B0GUT8 65 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 SPRY3O43610 288 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 IGLV1-44P01699 117 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FAM236CP0DP71 79 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 CRIP2P52943 208 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 UBE2L3P68036 154 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 MYOZ3Q8TDC0 251 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 MRPL20Q9BYC9 149 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
CDK5RAP3-232ENST00000584168 CD40P25942 277 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 RIGQ13278 110 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FAM208BQ5VWN6 2430 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 PFN2P35080 140 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FAM201AQ5SY85 155 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 ZNF329Q86UD4 541 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 METRNQ9UJH8 293 aa9.26□□□□□ -0.93
CDK5RAP3-232ENST00000584168 IQCF6A8MYZ5 107 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 D6R8Y8 96 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 J3QQQ9 107 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 SLC25A48Q6ZT89 311 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FOXC2Q99958 501 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 DCTN5Q9BTE1 182 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 CSMD2Q7Z408 3487 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FAM240AA0A1B0GVK7 77 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 H3BMM0 161 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 FCGR3BO75015 233 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 VKORC1L1Q8N0U8 176 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 ITLN1Q8WWA0 313 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 MLST8Q9BVC4 326 aa9.25□□□□□ -0.93
CDK5RAP3-232ENST00000584168 NBR2O15453 112 aa9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 ARMS2P0C7Q2 107 aa9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 NDUFA11Q86Y39 141 aa9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 TET2Q6N021 2002 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 TRAV40A0A0B4J280 105 aa9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 NXT2Q9NPJ8 142 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-232ENST00000584168 SPG11Q96JI7 2443 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 PROP1O75360 226 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 RNF152Q8N8N0 203 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 C9orf85Q96MD7 179 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 LRRK2Q5S007 2527 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 IGHV3-13P01766 116 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 HLA-DMBP28068 263 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 DUTP33316 252 aaKnown RBP9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 C8orf31Q8N9H6 132 aa9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 RPUSD1Q9UJJ7 312 aaKnown RBP9.23□□□□□ -0.93
CDK5RAP3-232ENST00000584168 SPINT2O43291 252 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 VPS13CQ709C8 3753 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 INS-IGF2F8WCM5 200 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 OVOL3O00110 214 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 CCL8P80075 99 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 GOLT1AQ6ZVE7 132 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 ORMDL3Q8N138 153 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 U3KQK5 164 aa9.22□□□□□ -0.93
CDK5RAP3-232ENST00000584168 TRAV3A0A0B4J244 114 aa9.21□□□□□ -0.93
CDK5RAP3-232ENST00000584168 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.21□□□□□ -0.93
CDK5RAP3-232ENST00000584168 LINC01600Q96MT4 127 aa9.21□□□□□ -0.93
CDK5RAP3-232ENST00000584168 CXXC4Q9H2H0 198 aa9.21□□□□□ -0.93
CDK5RAP3-232ENST00000584168 GNG12Q9UBI6 72 aa9.21□□□□□ -0.93
CDK5RAP3-232ENST00000584168 MED13LQ71F56 2210 aa9.21□□□□□ -0.94
CDK5RAP3-232ENST00000584168 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
CDK5RAP3-232ENST00000584168 C19orf84I3L1E1 186 aa9.21□□□□□ -0.94
CDK5RAP3-232ENST00000584168 HERVK_113P61574 105 aa9.21□□□□□ -0.94
CDK5RAP3-232ENST00000584168 ZNF843Q8N446 348 aa9.21□□□□□ -0.94
CDK5RAP3-232ENST00000584168 DEFB108BQ8NET1 73 aa9.21□□□□□ -0.94
CDK5RAP3-232ENST00000584168 LY6LH3BQJ8 138 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms