RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 HAMPP81172 84 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 ARL6IP6Q8N6S5 226 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 SFT2D1Q8WV19 159 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 C20orf144Q9BQM9 153 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 TMPRSS5Q9H3S3 457 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 PGPA6NDG6 321 aa8.39□□□□□ -1.07
TOP3A-215ENST00000583328 NXPH4O95158 308 aa8.39□□□□□ -1.07
TOP3A-215ENST00000583328 KIR3DS1Q14943 382 aa8.39□□□□□ -1.07
TOP3A-215ENST00000583328 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
TOP3A-215ENST00000583328 CMTM2Q8TAZ6 248 aa8.39□□□□□ -1.07
TOP3A-215ENST00000583328 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
TOP3A-215ENST00000583328 TRGV2A0A075B6R0 118 aa8.38□□□□□ -1.07
TOP3A-215ENST00000583328 TRAV1-1A0A0B4J248 108 aa8.38□□□□□ -1.07
TOP3A-215ENST00000583328 NPIPB6E9PJ23 425 aa8.38□□□□□ -1.07
TOP3A-215ENST00000583328 TEX46H3BTG2 121 aa8.38□□□□□ -1.07
TOP3A-215ENST00000583328 C5orf17Q8NAS9 161 aa8.38□□□□□ -1.07
TOP3A-215ENST00000583328 NKX6-2Q9C056 277 aaPredicted RBP8.38□□□□□ -1.07
TOP3A-215ENST00000583328 ARL2-SNX15V9GYD0 113 aa8.38□□□□□ -1.07
TOP3A-215ENST00000583328 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 IGKV2-40A0A087WW87 121 aaPredicted RBP8.37□□□□□ -1.07
TOP3A-215ENST00000583328 A0A1B0GV50 99 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 RBAKDNA6NC62 111 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 FAM74A7A6NL05 159 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 GGTLC3B5MD39 225 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 DIRC3C9JPN6 131 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 IGKV2D-40P01614 121 aaPredicted RBP8.37□□□□□ -1.07
TOP3A-215ENST00000583328 SLC25A5P05141 298 aaKnown RBP8.37□□□□□ -1.07
TOP3A-215ENST00000583328 PPT1P50897 306 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 UBE2G2P60604 165 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 DAZ2Q13117 558 aaKnown RBP8.37□□□□□ -1.07
TOP3A-215ENST00000583328 GFI1BQ5VTD9 330 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 C9orf47Q6ZRZ4 202 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 Q6ZTI0 123 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 ODF3Q96PU9 254 aa8.37□□□□□ -1.07
TOP3A-215ENST00000583328 SERTM2A0A1B0GWG4 89 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 J3KRW8 73 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
TOP3A-215ENST00000583328 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 LINC00477Q96M19 166 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 AGPAT4-IT1Q9H0P7 198 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 RPH3ALQ9UNE2 315 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
TOP3A-215ENST00000583328 K7EQM0 130 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 PAX4O43316 350 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 TCRAP04437 139 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 CT45A10P0DMU9 189 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 LEPP41159 167 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 GNG5P63218 68 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 BLOC1S1P78537 153 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 ERCC8Q13216 396 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 GOLT1AQ6ZVE7 132 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 VGLL1Q99990 258 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 TCEAL7Q9BRU2 100 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 EPDR1Q9UM22 224 aa8.35□□□□□ -1.07
TOP3A-215ENST00000583328 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 TRBV7-9A0A0J9YWB2 115 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 PAGE4O60829 102 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 ZNF324O75467 553 aaPredicted RBP8.34□□□□□ -1.07
TOP3A-215ENST00000583328 IFNA7P01567 189 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 ZNF138P52744 262 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 CCL20P78556 96 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 CST9LP1Q5W188 147 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 CYB561D1Q8N8Q1 229 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 FAM19A4Q96LR4 140 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 PYGO2Q9BRQ0 406 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 TMEM70Q9BUB7 260 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 GSN-AS1Q9NRJ2 163 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 MSRB1Q9NZV6 116 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 LY96Q9Y6Y9 160 aa8.34□□□□□ -1.07
TOP3A-215ENST00000583328 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-215ENST00000583328 IFNA1P01562 189 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 CRISP2P16562 243 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 LYPD5Q6UWN5 251 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 HIST1H2BAQ96A08 127 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
TOP3A-215ENST00000583328 FBLL1A6NHQ2 334 aaKnown RBP8.32□□□□□ -1.08
TOP3A-215ENST00000583328 KLLNB2CW77 178 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 F6UZH7 168 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 PEX7O00628 323 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 NMBP08949 121 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
TOP3A-215ENST00000583328 TMEM75Q8N9X5 138 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 SYT8Q8NBV8 401 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 ZNF680Q8NEM1 530 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 Q8TAT8 98 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 TXNDC17Q9BRA2 123 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 LINC00467Q9BRT7 94 aa8.32□□□□□ -1.08
TOP3A-215ENST00000583328 TRAV8-1A0A0A6YYK1 113 aa8.31□□□□□ -1.08
TOP3A-215ENST00000583328 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
TOP3A-215ENST00000583328 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
TOP3A-215ENST00000583328 EVI2AP22794 236 aa8.31□□□□□ -1.08
TOP3A-215ENST00000583328 TAGLN2P37802 199 aaKnown RBP8.31□□□□□ -1.08
TOP3A-215ENST00000583328 SLAQ13239 276 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms