RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 HSPG2P98160 4391 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
TRAF4-214ENST00000580073 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
TRAF4-214ENST00000580073 TMEM78Q5T7P6 136 aa9.3□□□□□ -0.92
TRAF4-214ENST00000580073 Q8N1X5 172 aa9.3□□□□□ -0.92
TRAF4-214ENST00000580073 LINC00612Q8N6U2 182 aa9.3□□□□□ -0.92
TRAF4-214ENST00000580073 ZNF680Q8NEM1 530 aa9.3□□□□□ -0.92
TRAF4-214ENST00000580073 PYGO2Q9BRQ0 406 aa9.3□□□□□ -0.92
TRAF4-214ENST00000580073 MRPS16Q9Y3D3 137 aaKnown RBP9.3□□□□□ -0.92
TRAF4-214ENST00000580073 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
TRAF4-214ENST00000580073 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
TRAF4-214ENST00000580073 KRTAP4-5Q9BYR2 181 aa9.29□□□□□ -0.92
TRAF4-214ENST00000580073 C7orf71A4D174 169 aa9.28□□□□□ -0.92
TRAF4-214ENST00000580073 PEX7O00628 323 aa9.28□□□□□ -0.92
TRAF4-214ENST00000580073 EREGO14944 169 aa9.28□□□□□ -0.92
TRAF4-214ENST00000580073 CST9LP1Q5W188 147 aa9.28□□□□□ -0.92
TRAF4-214ENST00000580073 PCNPQ8WW12 178 aaKnown RBP9.28□□□□□ -0.92
TRAF4-214ENST00000580073 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
TRAF4-214ENST00000580073 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
TRAF4-214ENST00000580073 A0A0J9YY99 117 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 GAGE12BA1L429 117 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 GAGE7O76087 117 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 IFNA7P01567 189 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 ZNF80P51504 273 aaPredicted RBP9.27□□□□□ -0.93
TRAF4-214ENST00000580073 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 GNG13Q9P2W3 67 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 ARL2-SNX15V9GYD0 113 aa9.27□□□□□ -0.93
TRAF4-214ENST00000580073 TRGV2A0A075B6R0 118 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 SCO2A0A1W2PP80 73 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 F6UZH7 168 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 GPX1P07203 203 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 NMBP08949 121 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 FLI1Q01543 452 aaPredicted RBP9.26□□□□□ -0.93
TRAF4-214ENST00000580073 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
TRAF4-214ENST00000580073 TEX261Q6UWH6 196 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 PRNTQ86SH4 94 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 SCRT2Q9NQ03 307 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
TRAF4-214ENST00000580073 SERTM2A0A1B0GWG4 89 aa9.25□□□□□ -0.93
TRAF4-214ENST00000580073 Q6AWC8 147 aa9.25□□□□□ -0.93
TRAF4-214ENST00000580073 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
TRAF4-214ENST00000580073 C18orf15Q96N68 181 aa9.25□□□□□ -0.93
TRAF4-214ENST00000580073 NKX6-2Q9C056 277 aaPredicted RBP9.25□□□□□ -0.93
TRAF4-214ENST00000580073 C11orf21Q9P2W6 132 aa9.25□□□□□ -0.93
TRAF4-214ENST00000580073 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
TRAF4-214ENST00000580073 LRP1BQ9NZR2 4599 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 ERVFC1-1P60608 527 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 ESRGQ1W209 222 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 Q86TA4 180 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 TREM1Q9NP99 234 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 MANBALQ9NQG1 85 aa9.24□□□□□ -0.93
TRAF4-214ENST00000580073 SIVA1O15304 175 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 HOXA5P20719 270 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 CRIP1P50238 77 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 PPT1P50897 306 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 BLOC1S1P78537 153 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 LINC00467Q9BRT7 94 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 DERL1Q9BUN8 251 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
TRAF4-214ENST00000580073 TRGV1A0A0A0MS02 117 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 TRBV6-1A0A0K0K1D8 114 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 BCL2P10415 239 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 LINC00315P59091 139 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 IFITM2Q01629 132 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 SLAQ13239 276 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 TMEM183BQ1AE95 376 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 Q6ZTI0 123 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 NFE4Q86UQ8 179 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 EIF4E3Q8N5X7 224 aaKnown RBP9.22□□□□□ -0.93
TRAF4-214ENST00000580073 C11orf72Q8NBR9 251 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 C11orf52Q96A22 123 aa9.22□□□□□ -0.93
TRAF4-214ENST00000580073 IGHV1OR15-1A0A075B7D0 117 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 TRAV9-2A0A087WT02 112 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 TEX46H3BTG2 121 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 K7EQM0 130 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 AKR1C3P42330 323 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 ANXA2RQ3ZCQ2 193 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 IBA57Q5T440 356 aaKnown RBP9.21□□□□□ -0.94
TRAF4-214ENST00000580073 ZC2HC1AQ96GY0 325 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 TCEAL7Q9BRU2 100 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
TRAF4-214ENST00000580073 A0A096LPF7 62 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 K7EP13 123 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 PAX4O43316 350 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 GNRH2O43555 120 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 GCGP01275 180 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 LTAP01374 205 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 TCL1AP56279 114 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms