RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MRAP2Q96G30 205 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
SKA2-204ENST00000578519 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 EPG5Q9HCE0 2579 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 TRGV11A0A075B6L2 103 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 LY6G6DO95868 133 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 CTAG1AP78358 180 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 DEFB136Q30KP8 78 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 DEFB114Q30KQ6 69 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 Q6ZWC4 215 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 OR2K2Q8NGT1 345 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 C11orf21Q9P2W6 132 aa8.33□□□□□ -1.08
SKA2-204ENST00000578519 LRRK2Q5S007 2527 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 MUC21A0A0G2JKD1 596 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 MUC21A0A140T8X8 626 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 H3BVH4 76 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 CD28P10747 220 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 CD33P20138 364 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 FHL3Q13643 280 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 TDRG1Q3Y452 100 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 MUC21Q5SSG8 566 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 C18orf65Q6ZTR6 163 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 RAX2Q96IS3 184 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 AP1S3Q96PC3 154 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 C20orf144Q9BQM9 153 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 TMEM70Q9BUB7 260 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
SKA2-204ENST00000578519 DOPEY2Q9Y3R5 2298 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 EDN2P20800 178 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 DEFB131AP59861 70 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 PRR9Q5T870 116 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
SKA2-204ENST00000578519 VAMP8Q9BV40 100 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 SCRT2Q9NQ03 307 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 TIMM8BQ9Y5J9 83 aaPredicted RBP8.31□□□□□ -1.08
SKA2-204ENST00000578519 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
SKA2-204ENST00000578519 FLNCQ14315 2725 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 IGHV1OR15-1A0A075B7D0 117 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 PRSS47A8MTI9 375 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 A8MTW9 85 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
SKA2-204ENST00000578519 CD7P09564 240 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
SKA2-204ENST00000578519 G0S2P27469 103 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 NUTF2P61970 127 aaKnown RBP8.3□□□□□ -1.08
SKA2-204ENST00000578519 XP32Q5T750 250 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 PET117Q6UWS5 81 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 ADAMTSL5Q6ZMM2 481 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 NDUFA11Q86Y39 141 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 TMEM61Q8N0U2 210 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 RNF185Q96GF1 192 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 PTPN13Q12923 2485 aa8.3□□□□□ -1.08
SKA2-204ENST00000578519 USP9YO00507 2555 aaPredicted RBP8.3□□□□□ -1.08
SKA2-204ENST00000578519 IGHV1-24A0A0C4DH33 117 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 K7EMI3 77 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 M0R381 172 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
SKA2-204ENST00000578519 HSBP1L1C9JCN9 74 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 H3BMM0 161 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 GNRH2O43555 120 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 IGKV3-20P01619 116 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 HBDP02042 147 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 EVI2AP22794 236 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 IFI27P40305 119 aaPredicted RBP8.28□□□□□ -1.08
SKA2-204ENST00000578519 PROK1P58294 105 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 DEFB1P60022 68 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 DEFA6Q01524 100 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 CD300EQ496F6 205 aaPredicted RBP8.28□□□□□ -1.08
SKA2-204ENST00000578519 DEFB125Q8N687 156 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 Q8N8P6 123 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 URB1-AS1Q96HZ7 61 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 DUX3Q96PT4 197 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 C20orf78Q9BR46 151 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 SELENOKQ9Y6D0 94 aa8.28□□□□□ -1.08
SKA2-204ENST00000578519 OR11H12B2RN74 326 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 NXPH4O95158 308 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 NPYP01303 97 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 SPINK13Q1W4C9 94 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 STHQ8IWL8 128 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 C11orf44Q8N8P7 122 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 FAM110AQ9BQ89 295 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 LINC00467Q9BRT7 94 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 MAP6D1Q9H9H5 199 aa8.27□□□□□ -1.09
SKA2-204ENST00000578519 KMT2BQ9UMN6 2715 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms