RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	BMI1	P35226	326 aa		11.36	□□□□□ -0.59
PRPF8-216	ENST00000577001	MAPKAPK5-AS1	Q8N8E1	139 aa		11.36	□□□□□ -0.59
PRPF8-216	ENST00000577001	SMIM17	P0DL12	118 aa		11.35	□□□□□ -0.59
PRPF8-216	ENST00000577001	CLPSL1	A2RUU4	121 aa		11.35	□□□□□ -0.59
PRPF8-216	ENST00000577001	OCIAD2	Q56VL3	154 aa		11.35	□□□□□ -0.59
PRPF8-216	ENST00000577001	CCDC144NL	Q6NUI1	221 aa		11.35	□□□□□ -0.59
PRPF8-216	ENST00000577001	CHD6	Q8TD26	2715 aa		11.35	□□□□□ -0.59
PRPF8-216	ENST00000577001		A0A0G2JLM5	398 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001		F5H697	171 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	METTL26	Q96S19	204 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	TRAV12-2	A0A075B6T6	113 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	TRAV8-2	A0A0B4J237	113 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	FGF6	P10767	208 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	ZNF502	Q8TBZ5	544 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	IGHV3-64	A0A075B6Q5	118 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	SMIM12	Q96EX1	92 aa		11.34	□□□□□ -0.59
PRPF8-216	ENST00000577001	CENPVL3	A0A0U1RRI6	287 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001		H3BUX3	64 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001	ATP5G2	Q06055	141 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001	SPCS1	Q9Y6A9	102 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001	KLRB1	Q12918	225 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001	C16orf54	Q6UWD8	224 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001	ZFAND3	Q9H8U3	227 aa		11.33	□□□□□ -0.6
PRPF8-216	ENST00000577001	CD5L	O43866	347 aa		11.32	□□□□□ -0.6
PRPF8-216	ENST00000577001	NPFF	O15130	113 aa		11.32	□□□□□ -0.6
PRPF8-216	ENST00000577001	LYPD1	Q8N2G4	141 aa		11.32	□□□□□ -0.6
PRPF8-216	ENST00000577001	PEF1	Q9UBV8	284 aa	Known RBP	11.32	□□□□□ -0.6
PRPF8-216	ENST00000577001	IGHV4-61	A0A0C4DH41	118 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	SIRPD	Q9H106	197 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	CYSLTR1	Q9Y271	337 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	IGHV3-73	A0A0B4J1V6	119 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	IGLC6	P0CF74	106 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	C11orf71	Q6IPW1	123 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	MRPL52	Q86TS9	123 aa	Known RBP	11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001	KLHL30-AS1	Q8NEE0	82 aa		11.31	□□□□□ -0.6
PRPF8-216	ENST00000577001		M0R1W7	72 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	PAX8	Q06710	450 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	ANXA2R	Q3ZCQ2	193 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	MS4A6A	Q9H2W1	248 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	TRAV41	A0A0B4J266	112 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	SCGB2A2	Q13296	93 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	PDE6H	Q13956	83 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	ODF1	Q14990	250 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	CD300E	Q496F6	205 aa	Predicted RBP	11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	SMIM15	Q7Z3B0	74 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	RNF5	Q99942	180 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	SPOCK3	Q9BQ16	436 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	PHLDA3	Q9Y5J5	127 aa		11.3	□□□□□ -0.6
PRPF8-216	ENST00000577001	IGKC	P01834	107 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	LMO4	P61968	165 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	MYOZ3	Q8TDC0	251 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	EEF1AKMT3	Q96AZ1	226 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	DOPEY1	Q5JWR5	2465 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	TRAV12-3	A0A0B4J271	114 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	ZNF493	Q6ZR52	646 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	AJUBA	Q96IF1	538 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	OPRPN	Q99935	248 aa	Predicted RBP	11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	CHAC1	Q9BUX1	264 aa		11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.29	□□□□□ -0.6
PRPF8-216	ENST00000577001	ZNF688	P0C7X2	276 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001	TRBV25-1	A0A075B6N4	114 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001	IGHV4-39	P01824	125 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001	SH2D6	Q7Z4S9	175 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001	BOD1L2	Q8IYS8	172 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001		Q8N6K4	173 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001	DUX3	Q96PT4	197 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001	HIST1H4G	Q99525	98 aa		11.28	□□□□□ -0.6
PRPF8-216	ENST00000577001		Q6AWC8	147 aa		11.27	□□□□□ -0.6
PRPF8-216	ENST00000577001	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.27	□□□□□ -0.6
PRPF8-216	ENST00000577001	KLK9	Q9UKQ9	250 aa		11.27	□□□□□ -0.6
PRPF8-216	ENST00000577001	LGALS9B	Q3B8N2	356 aa		11.27	□□□□□ -0.61
PRPF8-216	ENST00000577001	LGALS9C	Q6DKI2	356 aa		11.27	□□□□□ -0.61
PRPF8-216	ENST00000577001		A6NDN8	102 aa		11.27	□□□□□ -0.61
PRPF8-216	ENST00000577001		H7C2G1	150 aa		11.27	□□□□□ -0.61
PRPF8-216	ENST00000577001	RPL39	P62891	51 aa	Known RBP	11.27	□□□□□ -0.61
PRPF8-216	ENST00000577001	SCGB3A1	Q96QR1	104 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	IGHV7-4-1	A0A0J9YVY3	117 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	UBE2E1	P51965	193 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	SAMD5	Q5TGI4	173 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	ADAMTSL5	Q6ZMM2	481 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	S100A7A	Q86SG5	101 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	C11orf44	Q8N8P7	122 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	HHLA3	Q9XRX5	114 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	MUC4	Q99102	2169 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001		H3BMG7	143 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	SCGB2A1	O75556	95 aa		11.26	□□□□□ -0.61
PRPF8-216	ENST00000577001	RNASE13	Q5GAN3	156 aa	Known RBP	11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	C5orf56	Q8N8D9	126 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	C9orf118	A6NHY6	69 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	APOM	O95445	188 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	AVP	P01185	164 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	ATP5J2	P56134	94 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	OR4X2	Q8NGF9	303 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	OR1N2	Q8NGR9	330 aa		11.25	□□□□□ -0.61
PRPF8-216	ENST00000577001	RHPN1-AS1	Q9BWJ2	59 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	PPP1R14D	Q9NXH3	145 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	IGHV4-30-2	A0A087WSY4	118 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	DPM2	O94777	84 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	SMIM13	P0DJ93	91 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	LAGE3	Q14657	143 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 355.1 ms