RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TCEAL7Q9BRU2 100 aa16.47■□□□□ 0.23
SNF8-217ENST00000576353 ARL2-SNX15V9GYD0 113 aa16.47■□□□□ 0.23
SNF8-217ENST00000576353 TRAV26-1A0A087WT03 109 aa16.46■□□□□ 0.23
SNF8-217ENST00000576353 HOXA5P20719 270 aa16.46■□□□□ 0.23
SNF8-217ENST00000576353 CST9LP1Q5W188 147 aa16.46■□□□□ 0.23
SNF8-217ENST00000576353 LINC00479Q96M42 142 aa16.46■□□□□ 0.23
SNF8-217ENST00000576353 SDF2L1Q9HCN8 221 aa16.46■□□□□ 0.23
SNF8-217ENST00000576353 MRPL16Q9NX20 251 aaKnown RBP16.46■□□□□ 0.23
SNF8-217ENST00000576353 hCG_2014768A0A024R1R8 64 aa16.45■□□□□ 0.22
SNF8-217ENST00000576353 TRAV34A0A0B4J273 112 aa16.45■□□□□ 0.22
SNF8-217ENST00000576353 GCGP01275 180 aa16.45■□□□□ 0.22
SNF8-217ENST00000576353 H2AFB1P0C5Y9 115 aa16.45■□□□□ 0.22
SNF8-217ENST00000576353 H3BNG1 76 aa16.44■□□□□ 0.22
SNF8-217ENST00000576353 GNRH2O43555 120 aa16.44■□□□□ 0.22
SNF8-217ENST00000576353 PFN1P07737 140 aaKnown RBP16.44■□□□□ 0.22
SNF8-217ENST00000576353 ZNF80P51504 273 aaPredicted RBP16.44■□□□□ 0.22
SNF8-217ENST00000576353 RAB5CP51148 216 aa16.43■□□□□ 0.22
SNF8-217ENST00000576353 FAM3BP58499 235 aaPredicted RBP16.43■□□□□ 0.22
SNF8-217ENST00000576353 IGHV3-16A0A0C4DH30 117 aa16.42■□□□□ 0.22
SNF8-217ENST00000576353 PAGE4O60829 102 aa16.42■□□□□ 0.22
SNF8-217ENST00000576353 RASL10AQ92737 203 aa16.42■□□□□ 0.22
SNF8-217ENST00000576353 A0A0J9YY99 117 aa16.41■□□□□ 0.22
SNF8-217ENST00000576353 A0A1B0GV50 99 aa16.41■□□□□ 0.22
SNF8-217ENST00000576353 TYMSP04818 313 aa16.41■□□□□ 0.22
SNF8-217ENST00000576353 FMC1Q96HJ9 113 aa16.41■□□□□ 0.22
SNF8-217ENST00000576353 ZFP30Q9Y2G7 519 aa16.41■□□□□ 0.22
SNF8-217ENST00000576353 M0R2P5 195 aa16.4■□□□□ 0.22
SNF8-217ENST00000576353 CCL18P55774 89 aa16.4■□□□□ 0.22
SNF8-217ENST00000576353 UBE2G1P62253 170 aa16.4■□□□□ 0.22
SNF8-217ENST00000576353 SLAQ13239 276 aa16.4■□□□□ 0.22
SNF8-217ENST00000576353 Q86TA4 180 aa16.4■□□□□ 0.22
SNF8-217ENST00000576353 SLC51BQ86UW2 128 aa16.4■□□□□ 0.22
SNF8-217ENST00000576353 KMT2AQ03164 3969 aa16.39■□□□□ 0.21
SNF8-217ENST00000576353 IGHV3-53P01767 116 aa16.39■□□□□ 0.21
SNF8-217ENST00000576353 C11orf21Q9P2W6 132 aa16.39■□□□□ 0.21
SNF8-217ENST00000576353 FABP5P3A8MUU1 101 aa16.38■□□□□ 0.21
SNF8-217ENST00000576353 TRAV1-1A0A0B4J248 108 aa16.37■□□□□ 0.21
SNF8-217ENST00000576353 TRBV6-1A0A0K0K1D8 114 aa16.37■□□□□ 0.21
SNF8-217ENST00000576353 TEX46H3BTG2 121 aa16.37■□□□□ 0.21
SNF8-217ENST00000576353 VSIG2Q96IQ7 327 aa16.37■□□□□ 0.21
SNF8-217ENST00000576353 PRO0255Q9UI72 69 aa16.37■□□□□ 0.21
SNF8-217ENST00000576353 AKR1C3P42330 323 aa16.36■□□□□ 0.21
SNF8-217ENST00000576353 SULT1A2P50226 295 aa16.36■□□□□ 0.21
SNF8-217ENST00000576353 COX8CQ7Z4L0 72 aa16.36■□□□□ 0.21
SNF8-217ENST00000576353 PAX4O43316 350 aa16.35■□□□□ 0.21
SNF8-217ENST00000576353 S100A9P06702 114 aaKnown RBP16.35■□□□□ 0.21
SNF8-217ENST00000576353 FHL2Q14192 279 aa16.35■□□□□ 0.21
SNF8-217ENST00000576353 HHLA3Q9XRX5 114 aa16.35■□□□□ 0.21
SNF8-217ENST00000576353 TRGV4A0A0C4DH28 118 aa16.34■□□□□ 0.21
SNF8-217ENST00000576353 C9orf62Q8N4C0 152 aa16.34■□□□□ 0.21
SNF8-217ENST00000576353 MANBALQ9NQG1 85 aa16.34■□□□□ 0.21
SNF8-217ENST00000576353 IGLV2-18A0A075B6J9 118 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 TRAV4A0A0B4J268 109 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 M0R2N4 97 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 LTAP01374 205 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 OR4C5Q8NGB2 326 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 ZC2HC1AQ96GY0 325 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 ZNF479Q96JC4 524 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 LINC00588Q9Y4M8 146 aa16.33■□□□□ 0.2
SNF8-217ENST00000576353 VPS13DQ5THJ4 4388 aa16.32■□□□□ 0.2
SNF8-217ENST00000576353 CRYBA4P53673 196 aa16.32■□□□□ 0.2
SNF8-217ENST00000576353 CCL20P78556 96 aa16.32■□□□□ 0.2
SNF8-217ENST00000576353 FAM162BQ5T6X4 162 aa16.32■□□□□ 0.2
SNF8-217ENST00000576353 MUC4Q99102 2169 aa16.32■□□□□ 0.2
SNF8-217ENST00000576353 GNG13Q9P2W3 67 aa16.32■□□□□ 0.2
SNF8-217ENST00000576353 IGKV3D-20A0A0C4DH25 116 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 ORM1P02763 201 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 SFTA3P0C7M3 94 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 ZNF876PQ49A33 203 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 PTH2Q96A98 100 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 C9orf85Q96MD7 179 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 ICOSQ9Y6W8 199 aa16.31■□□□□ 0.2
SNF8-217ENST00000576353 A0A096LPF7 62 aa16.3■□□□□ 0.2
SNF8-217ENST00000576353 SCO2A0A1W2PP80 73 aa16.3■□□□□ 0.2
SNF8-217ENST00000576353 C9JCJ5 164 aa16.3■□□□□ 0.2
SNF8-217ENST00000576353 S100A4P26447 101 aaKnown RBP16.3■□□□□ 0.2
SNF8-217ENST00000576353 CRIP1P50238 77 aa16.3■□□□□ 0.2
SNF8-217ENST00000576353 ZNRF2Q8NHG8 242 aa16.3■□□□□ 0.2
SNF8-217ENST00000576353 TXNDC17Q9BRA2 123 aa16.3■□□□□ 0.2
SNF8-217ENST00000576353 B4DEV8 164 aa16.29■□□□□ 0.2
SNF8-217ENST00000576353 SH2D1AO60880 128 aa16.29■□□□□ 0.2
SNF8-217ENST00000576353 ASIPP42127 132 aa16.29■□□□□ 0.2
SNF8-217ENST00000576353 ESRGQ1W209 222 aa16.29■□□□□ 0.2
SNF8-217ENST00000576353 Q6ZR54 194 aa16.29■□□□□ 0.2
SNF8-217ENST00000576353 CIDEAO60543 219 aa16.28■□□□□ 0.2
SNF8-217ENST00000576353 RNASE3P12724 160 aaKnown RBP16.28■□□□□ 0.2
SNF8-217ENST00000576353 MRPL23Q16540 153 aaKnown RBP16.28■□□□□ 0.2
SNF8-217ENST00000576353 ZNF674Q2M3X9 581 aa16.28■□□□□ 0.2
SNF8-217ENST00000576353 A0A1B0GVG6 124 aa16.27■□□□□ 0.2
SNF8-217ENST00000576353 BAGE2Q86Y30 109 aa16.27■□□□□ 0.2
SNF8-217ENST00000576353 KRBOX1C9JBD0 128 aa16.26■□□□□ 0.19
SNF8-217ENST00000576353 IFNA1P01562 189 aa16.26■□□□□ 0.19
SNF8-217ENST00000576353 LINC00336Q6ZUF6 198 aa16.26■□□□□ 0.19
SNF8-217ENST00000576353 IL36BQ9NZH7 164 aa16.26■□□□□ 0.19
SNF8-217ENST00000576353 PGPEP1LA6NFU8 196 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 M0R036 132 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 RS1O15537 224 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 ZNF506Q5JVG8 444 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 DNLZQ5SXM8 178 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 NHLRC2Q8NBF2 726 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms