RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 PRR25Q96S07 402 aa6.13□□□□□ -1.43
TOM1L1-220ENST00000575333 C16orf95Q9H693 158 aa6.13□□□□□ -1.43
TOM1L1-220ENST00000575333 ZNF71Q9NQZ8 489 aaPredicted RBP6.13□□□□□ -1.43
TOM1L1-220ENST00000575333 ZDBF2Q9HCK1 2354 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 USF3Q68DE3 2245 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 RNASE2P10153 161 aaKnown RBP6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 TNFRSF4P43489 277 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 Q6ZS52 159 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 RNF185Q96GF1 192 aa6.12□□□□□ -1.43
TOM1L1-220ENST00000575333 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 VPS13AQ96RL7 3174 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 TMEM223A0PJW6 202 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 A8MZ25 164 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 LIFP15018 202 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 ZNF134P52741 427 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 Q6JHZ5 121 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 TMEM105Q8N8V8 129 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 CYSTM1Q9H1C7 97 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 TRAV3A0A0B4J244 114 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 SMKR1H3BMG3 65 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 TRIAP1O43715 76 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 SS18L1O75177 396 aaPredicted RBP6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 LYZL6O75951 148 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 IGHG2P01859 326 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 CD40P25942 277 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 ERHP84090 104 aaKnown RBP6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 LINC01561Q8N1V8 128 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 ZCCHC24Q8N2G6 241 aaKnown RBP6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 SMCR5Q8TEV8 140 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 DCANP1Q8TF63 244 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 TOMM6Q96B49 74 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 VSIG2Q96IQ7 327 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 SLC25A15Q9Y619 301 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 ICOSQ9Y6W8 199 aa6.11□□□□□ -1.43
TOM1L1-220ENST00000575333 A0A1W2PQU0 124 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 BUB3O43684 328 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 CXCL13O43927 109 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 MRPS21P82921 87 aaKnown RBP6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 DEFB110Q30KQ9 67 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 FAM216BQ8N7L0 139 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 SCGB3A1Q96QR1 104 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 FOXB1Q99853 325 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 DMDP11532 3685 aa6.1□□□□□ -1.43
TOM1L1-220ENST00000575333 IGHV1-45A0A0A0MS14 117 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 A0A0J9YX75 114 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 WNT9BO14905 357 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 BCE1O60756 84 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 SCRG1O75711 98 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 GFERP55789 205 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 RNF182Q8N6D2 247 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 TIMM21Q9BVV7 248 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 MYO15AQ9UKN7 3530 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 UNC13CQ8NB66 2214 aa6.09□□□□□ -1.43
TOM1L1-220ENST00000575333 SDHAF1A6NFY7 115 aa6.09□□□□□ -1.44
TOM1L1-220ENST00000575333 C11orf86A6NJI1 115 aa6.09□□□□□ -1.44
TOM1L1-220ENST00000575333 FAM222AQ5U5X8 452 aa6.09□□□□□ -1.44
TOM1L1-220ENST00000575333 WDR87Q6ZQQ6 2873 aa6.09□□□□□ -1.44
TOM1L1-220ENST00000575333 USP34Q70CQ2 3546 aa6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 FRYLO94915 3013 aa6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 LILRA5A6NI73 299 aa6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 USP17L23D6RBM5 183 aa6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 LGALS3P17931 250 aaKnown RBP6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 FAM53AQ6NSI3 398 aaPredicted RBP6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 C16orf47Q6ZP98 133 aaPredicted RBP6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 WFDC11Q8NEX6 87 aa6.08□□□□□ -1.44
TOM1L1-220ENST00000575333 IGKV1D-37A0A075B6S9 117 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 IGHV1-69DA0A0B4J2H0 117 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 IQCF6A8MYZ5 107 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 SH2D1AO60880 128 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 CDSNQ15517 529 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 VKORC1L1Q8N0U8 176 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 DIDO1Q9BTC0 2240 aaKnown RBP6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 ZNF318Q5VUA4 2279 aa6.07□□□□□ -1.44
TOM1L1-220ENST00000575333 TRAV26-2A0A0B4J265 109 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 M0R3E3 92 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 CRIP1P50238 77 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 CFHR3Q02985 330 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 ERCC8Q13216 396 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 FHL2Q14192 279 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 RHOHQ15669 191 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 Q6ZRU5 148 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 C9orf139Q6ZV77 190 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 CD177Q8N6Q3 437 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 IL17DQ8TAD2 202 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 SMIM2Q9BVW6 85 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 PROK2Q9HC23 129 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 RETNQ9HD89 108 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 FSCN3Q9NQT6 498 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 A0A0U1RQV1 116 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 H7C2G1 150 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 DLX1P56177 255 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 HOXA4Q00056 320 aaPredicted RBP6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 ATP5EP2Q5VTU8 51 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 SRXN1Q9BYN0 137 aa6.06□□□□□ -1.44
TOM1L1-220ENST00000575333 GNG12Q9UBI6 72 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms