RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 KISS1Q15726 138 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 MRPL51Q4U2R6 128 aaKnown RBP2.23□□□□□ -2.05
NUP88-209ENST00000574855 PYY3Q5JQD4 70 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 LINC01590Q5TEZ4 76 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 SLC35E3Q7Z769 313 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 TEN1Q86WV5 123 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 AMN1Q8IY45 258 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 ZNF101Q8IZC7 436 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 CIRBP-AS1Q8TBR5 109 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 TSLPQ969D9 159 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 TTTY13Q9BZ97 58 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 ATG5Q9H1Y0 275 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 PRO1933Q9H354 126 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 EPDR1Q9UM22 224 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 R4GMQ9 66 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 HLA-DRB4X5D2U9 266 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 MYO7AQ13402 2215 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 PRRC2BQ5JSZ5 2229 aaKnown RBP2.23□□□□□ -2.05
NUP88-209ENST00000574855 CCDC88CQ9P219 2028 aa2.23□□□□□ -2.05
NUP88-209ENST00000574855 HEATR5BQ9P2D3 2071 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 IGLV3-32A0A0A0MS00 114 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 A6NIN4 97 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 ZFP92A6NM28 416 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 A8MWP4 228 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 K7ERS5 55 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 PIN1P1O15428 100 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 PLXNB1O43157 2135 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 KLF7O75840 302 aaPredicted RBP2.22□□□□□ -2.05
NUP88-209ENST00000574855 NDUFB6O95139 128 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 SPINK8P0C7L1 97 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 IGHV3-30-3P0DP02 117 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 CCL3P10147 92 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 HLA-DMBP28068 263 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 RPL27AP46776 148 aaKnown RBP2.22□□□□□ -2.05
NUP88-209ENST00000574855 SNRPD3P62318 126 aaKnown RBP2.22□□□□□ -2.05
NUP88-209ENST00000574855 FOXI2Q6ZQN5 318 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 AAED1Q7RTV5 226 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 BPIFA4PQ86YQ2 179 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 PCP2Q8IVA1 136 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 TTC9CQ8N5M4 171 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 C14orf178Q8N769 122 aaPredicted RBP2.22□□□□□ -2.05
NUP88-209ENST00000574855 Q8N976 141 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 ZFP62Q8NB50 900 aaPredicted RBP2.22□□□□□ -2.05
NUP88-209ENST00000574855 APCDD1LQ8NCL9 501 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 C16orf74Q96GX8 76 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 PRELID3AQ96N28 172 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 YPEL2Q96QA6 119 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 S100A13Q99584 98 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 TTTY10Q9BZA0 68 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 C11orf1Q9H5F2 150 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 OSTCQ9NRP0 149 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 C21orf62Q9NYP8 219 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 OR5V1Q9UGF6 321 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
NUP88-209ENST00000574855 SRCAPQ6ZRS2 3230 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 NINQ8N4C6 2090 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 LOC107986453A0A1B0GWG9 222 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 ZNF736B4DX44 427 aaPredicted RBP2.21□□□□□ -2.06
NUP88-209ENST00000574855 UQCRQO14949 82 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 CYB5AP00167 134 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 HLA-DQA1P01909 254 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 TRGV3P03979 118 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
NUP88-209ENST00000574855 PTHLHP12272 177 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 NFYAP23511 347 aaPredicted RBP2.21□□□□□ -2.06
NUP88-209ENST00000574855 AKR1C2P52895 323 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 DSCR4P56555 118 aaPredicted RBP2.21□□□□□ -2.06
NUP88-209ENST00000574855 SYCNQ0VAF6 134 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 FOXF1Q12946 379 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 C16orf47Q6ZP98 133 aaPredicted RBP2.21□□□□□ -2.06
NUP88-209ENST00000574855 HEATR5AQ86XA9 2040 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 OR10P1Q8NGE3 313 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 OR4B1Q8NGF8 309 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 OR2T35Q8NGX2 323 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 SPTSSAQ969W0 71 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 GINS4Q9BRT9 223 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 UPK3BQ9BT76 320 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 NPCDR1Q9BY65 106 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 ZNF407Q9C0G0 2248 aa2.21□□□□□ -2.06
NUP88-209ENST00000574855 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
NUP88-209ENST00000574855 PDE4DIPQ5VU43 2346 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 POLEQ07864 2286 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 TRAV12-2A0A075B6T6 113 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 A0A0D9SG52 128 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 A6NED7 52 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 HMSDA8MTL9 139 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 C19orf84I3L1E1 186 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 M0R233 179 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 LECT2O14960 151 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 SYNGR2O43760 224 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 PITX3O75364 302 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 IGKV1D-33P01593 117 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 IGKV1-33P01594 117 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 HBDP02042 147 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 MT-ND6P03923 174 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 TRGC1P0CF51 173 aa2.2□□□□□ -2.06
NUP88-209ENST00000574855 IFITM1P13164 125 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms