RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 MRPL53Q96EL3 112 aaKnown RBP7.98□□□□□ -1.13
USP43-205ENST00000574408 ITPR3Q14573 2671 aa7.98□□□□□ -1.13
USP43-205ENST00000574408 RHPN1-AS1Q9BWJ2 59 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 HELZ2Q9BYK8 2649 aaKnown RBP7.97□□□□□ -1.13
USP43-205ENST00000574408 GAGE12BA1L429 117 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 GPHB5Q86YW7 130 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 DUX5Q96PT3 197 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
USP43-205ENST00000574408 IGHV7-4-1A0A0J9YVY3 117 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 GAGE1Q13065 139 aa7.97□□□□□ -1.13
USP43-205ENST00000574408 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.13
USP43-205ENST00000574408 TMEM213A2RRL7 107 aa7.96□□□□□ -1.13
USP43-205ENST00000574408 RPS20P60866 119 aaKnown RBP7.96□□□□□ -1.13
USP43-205ENST00000574408 FER1L6-AS1Q8NA97 138 aa7.96□□□□□ -1.13
USP43-205ENST00000574408 NBPF19A0A087WUL8 3843 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 A0A1B0GW15 77 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 J3KRW8 73 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 K7ERU9 68 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 GCSHP23434 173 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 FAM106AQ4KMX7 169 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 NACAE9PAV3 2078 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 EDN2P20800 178 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 WFDC11Q8NEX6 87 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 TENM4Q6N022 2769 aa7.96□□□□□ -1.14
USP43-205ENST00000574408 WNK1Q9H4A3 2382 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 C7orf71A4D174 169 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 DEFB1P60022 68 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 ZNF702PQ9H963 129 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 FLNAP21333 2647 aaKnown RBP7.95□□□□□ -1.14
USP43-205ENST00000574408 SRD5A1P18405 259 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 OCIAD2Q56VL3 154 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
USP43-205ENST00000574408 SOCS3O14543 225 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 PLA2G2AP14555 144 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 TMEM89A2RUT3 159 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 J3QKU1 62 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 IGLC6P0CF74 106 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 CTRLP40313 264 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 GATD1Q8NB37 220 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 ORAOV1Q8WV07 137 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 ACANP16112 2415 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 PRSS1P07477 247 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 TWIST1Q15672 202 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 LINC01559Q495D7 138 aa7.94□□□□□ -1.14
USP43-205ENST00000574408 TRAV8-6A0A0B4J262 113 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 SMAGPQ0VAQ4 97 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 FOXE3Q13461 319 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 SPATA12Q7Z6I5 190 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 ZNF575Q86XF7 245 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 OR10J6PQ8NGY7 276 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 C11orf21Q9P2W6 132 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 SMKR1H3BMG3 65 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 SRSF2Q01130 221 aaKnown RBP7.93□□□□□ -1.14
USP43-205ENST00000574408 HIST1H1AQ02539 215 aaPredicted RBP7.93□□□□□ -1.14
USP43-205ENST00000574408 ZNF493Q6ZR52 646 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 TTTY13Q9BZ97 58 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 IGKV3D-20A0A0C4DH25 116 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 F6UB75 175 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 K7EMT4 169 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 Q6ZQT7 251 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 GTF2H5Q6ZYL4 71 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 GTSF1LQ9H1H1 148 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 UFC1Q9Y3C8 167 aa7.93□□□□□ -1.14
USP43-205ENST00000574408 SYS1-DBNDD2H3BUS1 97 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 OVOL1O14753 267 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 ELANEP08246 267 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 FAM104BQ5XKR9 115 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 C12orf54Q6X4T0 127 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 AP5S1Q9NUS5 200 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 KMT2BQ9UMN6 2715 aaPredicted RBP7.92□□□□□ -1.14
USP43-205ENST00000574408 NCR2O95944 276 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 PRR9Q5T870 116 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 PSMG3-AS1Q96PY0 264 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 MSRB1Q9NZV6 116 aa7.92□□□□□ -1.14
USP43-205ENST00000574408 LGALS1P09382 135 aaKnown RBP7.91□□□□□ -1.14
USP43-205ENST00000574408 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
USP43-205ENST00000574408 LINC00477Q96M19 166 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 D6R8Y8 96 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 SYNJ2BPP57105 145 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 CACNG7P62955 275 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 SCGB2A2Q13296 93 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 Q8N976 141 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 CLUHP3Q96NS8 147 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 ZNF469Q96JG9 3925 aaPredicted RBP7.91□□□□□ -1.14
USP43-205ENST00000574408 IGHV4OR15-8A0A075B7B6 117 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 A0A087WW49 117 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 K7EP13 123 aa7.91□□□□□ -1.14
USP43-205ENST00000574408 IGHV1-24A0A0C4DH33 117 aa7.9□□□□□ -1.14
USP43-205ENST00000574408 MRPL51Q4U2R6 128 aaKnown RBP7.9□□□□□ -1.14
USP43-205ENST00000574408 LENEPQ9Y5L5 61 aa7.9□□□□□ -1.14
USP43-205ENST00000574408 ZFAND2AQ8N6M9 145 aa7.9□□□□□ -1.14
USP43-205ENST00000574408 OR1N2Q8NGR9 330 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms