RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 CNFNQ9BYD5 112 aa15.27■□□□□ 0.04
CHRNE-202ENST00000572438 MAP6D1Q9H9H5 199 aa15.27■□□□□ 0.04
CHRNE-202ENST00000572438 NAGKQ9UJ70 344 aa15.27■□□□□ 0.04
CHRNE-202ENST00000572438 SAP30O75446 220 aa15.27■□□□□ 0.03
CHRNE-202ENST00000572438 SRIP30626 198 aa15.27■□□□□ 0.03
CHRNE-202ENST00000572438 MUC21A0A0G2JKD1 596 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 MUC21A0A140T8X8 626 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 IFITM10A6NMD0 228 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 KNCNA6PVL3 124 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 HLA-DRB4P13762 266 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 TSPOP30536 169 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 Q0VG73 95 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 PDZD11Q5EBL8 140 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 PRR31Q5SQ13 230 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 MUC21Q5SSG8 566 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 HLA-DRB4X5D2U9 266 aa15.26■□□□□ 0.03
CHRNE-202ENST00000572438 AMTNQ6UX39 209 aa15.25■□□□□ 0.03
CHRNE-202ENST00000572438 ZNF493Q6ZR52 646 aa15.25■□□□□ 0.03
CHRNE-202ENST00000572438 C7orf71A4D174 169 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 SSTP61278 116 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 ANXA2RQ3ZCQ2 193 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 LOC102724200A0A096LPH7 203 aaPredicted RBP15.24■□□□□ 0.03
CHRNE-202ENST00000572438 A8MTW9 85 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 NTF3P20783 257 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 S100A2P29034 98 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 CDKN1BP46527 198 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 TWIST1Q15672 202 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 OR10J3Q5JRS4 329 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 TP53TG3Q9ULZ0 132 aa15.24■□□□□ 0.03
CHRNE-202ENST00000572438 H3BMM0 161 aa15.23■□□□□ 0.03
CHRNE-202ENST00000572438 M0R2Z0 102 aa15.23■□□□□ 0.03
CHRNE-202ENST00000572438 PF4P02776 101 aa15.23■□□□□ 0.03
CHRNE-202ENST00000572438 OR5AL1P0C617 328 aa15.23■□□□□ 0.03
CHRNE-202ENST00000572438 ALKBH7Q9BT30 221 aaPredicted RBP15.23■□□□□ 0.03
CHRNE-202ENST00000572438 WNK1Q9H4A3 2382 aa15.23■□□□□ 0.03
CHRNE-202ENST00000572438 SNAI2O43623 268 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 IGLV1-51P01701 117 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 ZNF124Q15973 351 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 SPINK13Q1W4C9 94 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 BAGE3Q86Y29 109 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 TMEM256Q8N2U0 113 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 TRAV12-3A0A0B4J271 114 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 ZNF324O75467 553 aaPredicted RBP15.22■□□□□ 0.03
CHRNE-202ENST00000572438 ODF3L2Q3SX64 289 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 LINC00482Q8N8I6 264 aa15.22■□□□□ 0.03
CHRNE-202ENST00000572438 TRAV12-2A0A075B6T6 113 aa15.21■□□□□ 0.03
CHRNE-202ENST00000572438 ASIPP42127 132 aa15.21■□□□□ 0.03
CHRNE-202ENST00000572438 OR2K2Q8NGT1 345 aa15.21■□□□□ 0.03
CHRNE-202ENST00000572438 H3BVH4 76 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 FAM159AQ6UWV7 190 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 OR10AG1Q8NH19 301 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 C18orf32Q8TCD1 76 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 HIST1H2BLQ99880 126 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 MSRB1Q9NZV6 116 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 DNLZQ5SXM8 178 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 KCNS1Q96KK3 526 aa15.2■□□□□ 0.02
CHRNE-202ENST00000572438 NUPR1O60356 82 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 SERF1AO75920 110 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 MED14OSP0DP75 135 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 FABP4P15090 132 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 S100A4P26447 101 aaKnown RBP15.19■□□□□ 0.02
CHRNE-202ENST00000572438 LINC00310P59036 64 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 CACNG7P62955 275 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 CITED1Q99966 193 aa15.19■□□□□ 0.02
CHRNE-202ENST00000572438 SORL1Q92673 2214 aa15.18■□□□□ 0.02
CHRNE-202ENST00000572438 IGHV4-4A0A075B6R2 117 aa15.18■□□□□ 0.02
CHRNE-202ENST00000572438 RBMY1BA6NDE4 496 aaKnown RBP15.18■□□□□ 0.02
CHRNE-202ENST00000572438 RBMY1EA6NEQ0 496 aaKnown RBP15.18■□□□□ 0.02
CHRNE-202ENST00000572438 GNRH2O43555 120 aa15.18■□□□□ 0.02
CHRNE-202ENST00000572438 RBMY1DP0C7P1 496 aaKnown RBP15.18■□□□□ 0.02
CHRNE-202ENST00000572438 ESDP10768 282 aa15.18■□□□□ 0.02
CHRNE-202ENST00000572438 FAM104BQ5XKR9 115 aa15.18■□□□□ 0.02
CHRNE-202ENST00000572438 TMEM191AQ9H0A3 160 aa15.18■□□□□ 0.02
CHRNE-202ENST00000572438 NIPBLQ6KC79 2804 aaeCLIP15.18■□□□□ 0.02
CHRNE-202ENST00000572438 OR11H12B2RN74 326 aa15.17■□□□□ 0.02
CHRNE-202ENST00000572438 AMBPP02760 352 aa15.17■□□□□ 0.02
CHRNE-202ENST00000572438 TDRG1Q3Y452 100 aa15.17■□□□□ 0.02
CHRNE-202ENST00000572438 CMC4P56277 68 aaPredicted RBP15.17■□□□□ 0.02
CHRNE-202ENST00000572438 IQCJQ1A5X6 159 aa15.17■□□□□ 0.02
CHRNE-202ENST00000572438 SPANXN1Q5VSR9 72 aa15.17■□□□□ 0.02
CHRNE-202ENST00000572438 AMN1Q8IY45 258 aa15.17■□□□□ 0.02
CHRNE-202ENST00000572438 TIMM8BQ9Y5J9 83 aaPredicted RBP15.17■□□□□ 0.02
CHRNE-202ENST00000572438 FXYD7P58549 80 aa15.16■□□□□ 0.02
CHRNE-202ENST00000572438 DMRTA1Q5VZB9 504 aa15.16■□□□□ 0.02
CHRNE-202ENST00000572438 CLUHP3Q96NS8 147 aa15.16■□□□□ 0.02
CHRNE-202ENST00000572438 SCRT2Q9NQ03 307 aa15.16■□□□□ 0.02
CHRNE-202ENST00000572438 AGRNO00468 2067 aa15.15■□□□□ 0.02
CHRNE-202ENST00000572438 OR10D4PQ8NGN7 298 aa15.15■□□□□ 0.02
CHRNE-202ENST00000572438 TMEM18Q96B42 140 aa15.15■□□□□ 0.02
CHRNE-202ENST00000572438 RCHY1Q96PM5 261 aa15.15■□□□□ 0.02
CHRNE-202ENST00000572438 CRXO43186 299 aaPredicted RBP15.15■□□□□ 0.02
CHRNE-202ENST00000572438 RNASE3P12724 160 aaKnown RBP15.15■□□□□ 0.02
CHRNE-202ENST00000572438 LURAP1LQ8IV03 231 aa15.15■□□□□ 0.02
CHRNE-202ENST00000572438 PACRGQ96M98 296 aaPredicted RBP15.15■□□□□ 0.02
CHRNE-202ENST00000572438 JMJD1CQ15652 2540 aa15.14■□□□□ 0.01
CHRNE-202ENST00000572438 IGHV1OR15-1A0A075B7D0 117 aa15.14■□□□□ 0.01
CHRNE-202ENST00000572438 CD7P09564 240 aa15.14■□□□□ 0.01
CHRNE-202ENST00000572438 U3KQK5 164 aa15.14■□□□□ 0.01
CHRNE-202ENST00000572438 BEAN1Q3B7T3 259 aa15.13■□□□□ 0.01
CHRNE-202ENST00000572438 PHLDA3Q9Y5J5 127 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms