RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 F2Z2F3 143 aa8.73□□□□□ -1.01
CDRT1-206ENST00000571263 CA1P00915 261 aaPredicted RBP8.73□□□□□ -1.01
CDRT1-206ENST00000571263 FXYD7P58549 80 aa8.73□□□□□ -1.01
CDRT1-206ENST00000571263 PRR9Q5T870 116 aa8.73□□□□□ -1.01
CDRT1-206ENST00000571263 LINC01587Q99440 93 aa8.73□□□□□ -1.01
CDRT1-206ENST00000571263 XCL2Q9UBD3 114 aa8.73□□□□□ -1.01
CDRT1-206ENST00000571263 TRGV11A0A075B6L2 103 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 IGKV3D-20A0A0C4DH25 116 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 SMIM27A0A1W2PRY6 76 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 MED14OSP0DP75 135 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 KIR3DS1Q14943 382 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 ANXA2RQ3ZCQ2 193 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 ATRAIDQ6UW56 229 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 COL6A5A8TX70 2615 aa8.72□□□□□ -1.01
CDRT1-206ENST00000571263 SMIM9A6NGZ8 99 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.02
CDRT1-206ENST00000571263 ASIPP42127 132 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 COX19Q49B96 90 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 WDR73Q6P4I2 378 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 ZNF493Q6ZR52 646 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 Q6ZWC4 215 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 CSNK1G2-AS1Q8NCQ2 148 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 NAGKQ9UJ70 344 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 TP53TG3Q9ULZ0 132 aa8.71□□□□□ -1.02
CDRT1-206ENST00000571263 A0A1B0GW15 77 aa8.7□□□□□ -1.02
CDRT1-206ENST00000571263 CBY3A6NI87 242 aa8.7□□□□□ -1.02
CDRT1-206ENST00000571263 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
CDRT1-206ENST00000571263 OR5AL1P0C617 328 aa8.7□□□□□ -1.02
CDRT1-206ENST00000571263 FER1L6-AS1Q8NA97 138 aa8.7□□□□□ -1.02
CDRT1-206ENST00000571263 NEU1Q99519 415 aa8.7□□□□□ -1.02
CDRT1-206ENST00000571263 SORL1Q92673 2214 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 TMSB15BA0A087X1C1 80 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 HIGD1CA8MV81 97 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 S100A8P05109 93 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 CACNG7P62955 275 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 MUC21Q5SSG8 566 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 RASL11AQ6T310 242 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 ZNF705AQ6ZN79 300 aaPredicted RBP8.69□□□□□ -1.02
CDRT1-206ENST00000571263 ATP5L2Q7Z4Y8 100 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 C1orf158Q8N1D5 194 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
CDRT1-206ENST00000571263 C11orf21Q9P2W6 132 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 TP53TG1Q9Y2A0 90 aa8.69□□□□□ -1.02
CDRT1-206ENST00000571263 TRBV24-1A0A075B6N3 115 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 TYMSP04818 313 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 ZNF415Q09FC8 603 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 RIGQ13278 110 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 RRN3P1Q2M238 152 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 RCHY1Q96PM5 261 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 SPXQ9BT56 116 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 NDUFAF3Q9BU61 184 aa8.68□□□□□ -1.02
CDRT1-206ENST00000571263 STAB1Q9NY15 2570 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 A0A1B0GUT8 65 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 GRIFINA4D1Z8 144 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 GNRH2O43555 120 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 SNAI2O43623 268 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 FRMD6-AS1P0C7T7 363 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
CDRT1-206ENST00000571263 RBMY1CP0DJD4 496 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 FAM3BP58499 235 aaPredicted RBP8.67□□□□□ -1.02
CDRT1-206ENST00000571263 ELOBQ15370 118 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
CDRT1-206ENST00000571263 PIK3CD-AS1Q5SR53 167 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 TMEM88Q6PEY1 159 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 TMEM263Q8WUH6 116 aaKnown RBP8.67□□□□□ -1.02
CDRT1-206ENST00000571263 GTSF1Q8WW33 167 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 PTH2Q96A98 100 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 RNF183Q96D59 192 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 PHLDA3Q9Y5J5 127 aa8.67□□□□□ -1.02
CDRT1-206ENST00000571263 IGHV4-4A0A075B6R2 117 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 IGHV3-16A0A0C4DH30 117 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 GZMBP10144 247 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 HTN1P15515 57 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 CTRLP40313 264 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 TCL1AP56279 114 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 DEFB121Q5J5C9 76 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 LYZL1Q6UWQ5 148 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 Q6ZQT7 251 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 ZNF575Q86XF7 245 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 SCRT2Q9NQ03 307 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 URGCP-MRPS24S4R325 110 aa8.66□□□□□ -1.02
CDRT1-206ENST00000571263 AGRNO00468 2067 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 SNURFLB1AK76 121 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 SPRY2O43597 315 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 MIFP14174 115 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 SMIM15Q7Z3B0 74 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 CBLN2Q8IUK8 224 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 ZFP82Q8N141 532 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 FAM210BQ96KR6 192 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 C9orf85Q96MD7 179 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms