RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TRAV21A0A0B4J279 112 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 PCP4L1A6NKN8 68 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 SLURP1P55000 103 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
RPAIN-208ENST00000571043 WFDC3Q8IUB2 231 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 F6UB75 175 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 ZNF324O75467 553 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-208ENST00000571043 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 PRR9Q5T870 116 aa12.98□□□□□ -0.33
RPAIN-208ENST00000571043 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 DEFB1P60022 68 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 TWIST1Q15672 202 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 DEFB136Q30KP8 78 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 KLHL30-AS1Q8NEE0 82 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 ZNF747Q9BV97 191 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 SELENOKQ9Y6D0 94 aa12.97□□□□□ -0.33
RPAIN-208ENST00000571043 NTF3P20783 257 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 AMTP48728 403 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 CDPF1Q6NVV7 123 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 Q6ZWC4 215 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 NDUFA11Q86Y39 141 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 OR9G4Q8NGQ1 327 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 ODF3Q96PU9 254 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 U3KQK5 164 aa12.96□□□□□ -0.33
RPAIN-208ENST00000571043 TRAV2A0A0B4J234 112 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 OR5AL1P0C617 328 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 TFPI2P48307 235 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 C12orf54Q6X4T0 127 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 NIT1Q86X76 327 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 CHCHD1Q96BP2 118 aaKnown RBP12.95□□□□□ -0.34
RPAIN-208ENST00000571043 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 GSN-AS1Q9NRJ2 163 aa12.95□□□□□ -0.34
RPAIN-208ENST00000571043 SNAI2O43623 268 aa12.94□□□□□ -0.34
RPAIN-208ENST00000571043 HSBP1O75506 76 aa12.94□□□□□ -0.34
RPAIN-208ENST00000571043 ZNF688P0C7X2 276 aa12.94□□□□□ -0.34
RPAIN-208ENST00000571043 C3orf56Q8N813 242 aa12.94□□□□□ -0.34
RPAIN-208ENST00000571043 TRRAPQ9Y4A5 3859 aa12.94□□□□□ -0.34
RPAIN-208ENST00000571043 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 KLLNB2CW77 178 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 PMCHP20382 165 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 CACNG7P62955 275 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 MDFIQ99750 246 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 ANK2Q01484 3957 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 A0A0J9YX75 114 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 LEPP41159 167 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 MUC21Q5SSG8 566 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
RPAIN-208ENST00000571043 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
RPAIN-208ENST00000571043 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-208ENST00000571043 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
RPAIN-208ENST00000571043 CSN3P07498 182 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
RPAIN-208ENST00000571043 SSTP61278 116 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 NSUN5P1Q3KNT7 163 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 Q6ZQT7 251 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 ORMDL3Q8N138 153 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 RAX2Q96IS3 184 aa12.92□□□□□ -0.34
RPAIN-208ENST00000571043 J3KRW8 73 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 SCGB1D1O95968 90 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 LINC00614P0C842 121 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 FHL3Q13643 280 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 MRPL51Q4U2R6 128 aaKnown RBP12.91□□□□□ -0.34
RPAIN-208ENST00000571043 SHISA2Q6UWI4 295 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 VWFP04275 2813 aa12.91□□□□□ -0.34
RPAIN-208ENST00000571043 CCL24O00175 119 aa12.9□□□□□ -0.34
RPAIN-208ENST00000571043 FAM19A2Q8N3H0 131 aa12.9□□□□□ -0.34
RPAIN-208ENST00000571043 DUX3Q96PT4 197 aa12.9□□□□□ -0.34
RPAIN-208ENST00000571043 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
RPAIN-208ENST00000571043 D6R8Y8 96 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 M0R2Z0 102 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 PPBPP02775 128 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 ASIPP42127 132 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
RPAIN-208ENST00000571043 RAB4AP20338 218 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 TSPOP30536 169 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 KRTAP21-3Q3LHN1 58 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 CMYA5Q8N3K9 4069 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 CD33P20138 364 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 CKS2P33552 79 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 DEFB114Q30KQ6 69 aa12.88□□□□□ -0.35
RPAIN-208ENST00000571043 SPANXN1Q5VSR9 72 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms