RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SMIM4Q8WVI0 70 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 PPDPFLQ8WWR9 84 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 LINC00526Q96FQ7 95 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 NMNAT3Q96T66 252 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 TMEM147Q9BVK8 224 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 TMEM222Q9H0R3 208 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 RNASE7Q9H1E1 156 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 TVP23BQ9NYZ1 205 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 CHCHD2Q9Y6H1 151 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 CELSR1Q9NYQ6 3014 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 APCP25054 2843 aa2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 TET2Q6N021 2002 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-212ENST00000567944 MDC1Q14676 2089 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV27A0A087WT01 109 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 TRBV6-7A0A0A0MS04 114 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV13-1A0A0B4J241 112 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM236DA0A1B0GTK5 79 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SPAARA0A1B0GVQ0 90 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF860A6NHJ4 632 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 YPEL1O60688 119 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CST7O76096 145 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 NDUFB2O95178 105 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF682O95780 498 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 IGHMP01871 453 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 PRH1P02810 166 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC25A5P05141 298 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CECR9P0C854 216 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 P0DMU3 169 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM231AP0DMU4 169 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM231CP0DMU5 169 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM236CP0DP71 79 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CRYGAP11844 174 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC25A6P12236 298 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 IL3RAP26951 378 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 PSMB2P49721 201 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 ATP5EP56381 51 aaPredicted RBP2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SMIM11AP58511 58 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 MTPNP58546 118 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 TAS2R45P59539 299 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 HERVK_113P63121 156 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC25A11Q02978 314 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SYCNQ0VAF6 134 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CDK5R1Q15078 307 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 C12orf74Q32Q52 190 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 Q6ZS52 159 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF550Q7Z398 422 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 DRAM1Q8N682 238 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 C15orf53Q8NAA6 179 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 OR8B3Q8NGG8 313 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 OR5H2Q8NGV7 314 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 OR2T10Q8NGZ9 312 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 MRPL30Q8TCC3 161 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 C18orf32Q8TCD1 76 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 BORCS8Q96FH0 119 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 KCNS1Q96KK3 526 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 LINC00477Q96M19 166 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 YPEL2Q96QA6 119 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 NMES1Q9C002 83 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CST11Q9H112 138 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC39A9Q9NUM3 307 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CKLFQ9UBR5 152 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 MTFP1Q9UDX5 166 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 HES2Q9Y543 173 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 LINC00312Q9Y6C7 94 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 CACNA1CQ13936 2221 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 ADGRG4Q8IZF6 3080 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 AKAP6Q13023 2319 aa2.06□□□□□ -2.08
HERPUD1-212ENST00000567944 NYNRINQ9P2P1 1898 aaKnown RBP2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 TRPM6Q9BX84 2022 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ABCA4P78363 2273 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV12-2A0A075B6T6 113 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 SMIM26A0A096LP01 95 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 A8MWV9 139 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 SMKR1H3BMG3 65 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 CCDC179H3BU77 68 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 J3QKU1 62 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 J3QQQ9 107 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 M0R2P5 195 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 UPK2O00526 184 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 UBE2L6O14933 153 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 MRPS12O15235 138 aaKnown RBP2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 SOCS1O15524 211 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 NDUFB3O43676 98 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 NDUFS5O43920 106 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 RBP4P02753 201 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 PRB1P04280 392 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ACYP1P07311 99 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF688P0C7X2 276 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 PFN2P35080 140 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 GALR1P47211 349 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 KRTDAPP60985 99 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 YPEL3P61236 119 aaPredicted RBP2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 PPP1CAP62136 330 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC38A11Q08AI6 406 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF791Q3KP31 576 aaPredicted RBP2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 TDRG1Q3Y452 100 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 KRTAP13-2Q52LG2 175 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM78AQ5JUQ0 283 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 RPL7L1Q6DKI1 246 aaKnown RBP2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 HRCT1Q6UXD1 115 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms