RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 K7EQM0 130 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 P01737 135 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 CSN3P07498 182 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 CT45A10P0DMU9 189 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 TFPI2P48307 235 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 NDUFA6P56556 154 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 ZNF738Q8NE65 137 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 OR2D3Q8NGH3 330 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 OR1N2Q8NGR9 330 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 ZNF418Q8TF45 676 aaPredicted RBP4.27□□□□□ -1.73
SF3B3-210ENST00000567654 TSKUQ8WUA8 353 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 MRPL53Q96EL3 112 aaKnown RBP4.27□□□□□ -1.73
SF3B3-210ENST00000567654 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 PGLYRP4Q96LB8 373 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 MAST4O15021 2626 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 F8P00451 2351 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 RBAKDNA6NC62 111 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 J3KRW8 73 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 K7EQG2 157 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 UBE2CO00762 179 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 NDUFA7O95182 113 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 ZNF688P0C7X2 276 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 MEOX2P50222 304 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 ZNF138P52744 262 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 SLAQ13239 276 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 KIAA1644Q3SXP7 199 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 OR4B1Q8NGF8 309 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 FAM19A4Q96LR4 140 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 BIN3Q9NQY0 253 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 TRAPPC1Q9Y5R8 145 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 C2CD3Q4AC94 2353 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 DNAH3Q8TD57 4116 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 NOTCH2Q04721 2471 aa4.26□□□□□ -1.73
SF3B3-210ENST00000567654 SETD2Q9BYW2 2564 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-210ENST00000567654 TRRAPQ9Y4A5 3859 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 IGKV3D-20A0A0C4DH25 116 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 MUC21A0A0G2JKD1 596 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 MUC21A0A140T8X8 626 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 GRIFINA4D1Z8 144 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 A8MWL6 223 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 OVOL1O14753 267 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 NUPR1O60356 82 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 ARMS2P0C7Q2 107 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 HIST1H1AQ02539 215 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-210ENST00000567654 SMUG1Q53HV7 270 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 PDZD11Q5EBL8 140 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 MUC21Q5SSG8 566 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 SAPCD1Q5SSQ6 148 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 FAM162BQ5T6X4 162 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 TMEM78Q5T7P6 136 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 TMEM61Q8N0U2 210 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 OR8A1Q8NGG7 326 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 OR9G4Q8NGQ1 327 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 SPATA3Q8NHX4 192 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 NAT8BQ9UHF3 227 aa4.25□□□□□ -1.73
SF3B3-210ENST00000567654 RBMY1BA6NDE4 496 aaKnown RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 RBMY1EA6NEQ0 496 aaKnown RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 FBLL1A6NHQ2 334 aaKnown RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 CCL24O00175 119 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 TCF21O43680 179 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 CRLF1O75462 422 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 S100A6P06703 90 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 RBMY1DP0C7P1 496 aaKnown RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 IGLC6P0CF74 106 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 CAMPP49913 170 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 SCGB2A2Q13296 93 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 PSMG4Q5JS54 123 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 RBPMS2Q6ZRY4 209 aaKnown RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 APRG1Q8IVJ8 170 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 TMEM256Q8N2U0 113 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 GNB1LQ9BYB4 327 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 GFRA4Q9GZZ7 299 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 PPP1R14DQ9NXH3 145 aa4.24□□□□□ -1.73
SF3B3-210ENST00000567654 TSSC4Q9Y5U2 329 aaPredicted RBP4.24□□□□□ -1.73
SF3B3-210ENST00000567654 A0A0J9YX75 114 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 XKRY2A2RUG3 117 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 FAM231BA6NCW3 169 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 KNCNA6PVL3 124 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 FABP5P3A8MUU1 101 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 CRISP2P16562 243 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 CTRLP40313 264 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 RAB4BP61018 213 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 SSTP61278 116 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 IQCJQ1A5X6 159 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 DEFB114Q30KQ6 69 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 NSUN5P1Q3KNT7 163 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 COA6Q5JTJ3 125 aaKnown RBP4.23□□□□□ -1.73
SF3B3-210ENST00000567654 LYZL1Q6UWQ5 148 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 ATP5L2Q7Z4Y8 100 aa4.23□□□□□ -1.73
SF3B3-210ENST00000567654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
SF3B3-210ENST00000567654 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms