RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 GLRXP35754 106 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CDKN2CP42773 168 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CRYBA4P53673 196 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 NDUFA6P56556 154 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TAS2R41P59536 307 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 MAGOHP61326 146 aaKnown RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 HSPE1P61604 102 aaKnown RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TPM4P67936 248 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CCL7P80098 99 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 BASP1P80723 227 aaKnown RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 RPL19P84098 196 aaKnown RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 ITGB3BPQ13352 177 aaPredicted RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 RTL8BQ17RB0 113 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 Q5XG85 94 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 Q6ZRX8 168 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 SMIM20Q8N5G0 67 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 MORN4Q8NDC4 146 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 OR8J3Q8NGG0 315 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 OTOSQ8NHW6 89 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 SMIM11BQ8TCY0 68 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TMEM141Q96I45 108 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 AP1S3Q96PC3 154 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 RTL8AQ9BWD3 113 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 ATG5Q9H1Y0 275 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 NDUFAF1Q9Y375 327 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 MPC1Q9Y5U8 109 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 AKAP11Q9UKA4 1901 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 PCLOQ9Y6V0 5065 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 HERC2O95714 4834 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 SPTBP11277 2137 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 KDM5AP29375 1690 aaKnown RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 ABCA1O95477 2261 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 PAPPAQ13219 1627 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 AHCTF1Q8WYP5 2266 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TSC2P49815 1807 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 KIF13AQ9H1H9 1805 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CSMD3Q7Z407 3707 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 SYNJ1O43426 1573 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 MYH1P12882 1939 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 HELZP42694 1942 aaKnown RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TRAV1-2A0A0B4J238 106 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TRAV22A0A0B4J277 110 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TRBV10-1A0A0K0K1A3 114 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 LOC107984640A0A0U1RRK4 108 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TCRBV3S1A0A5B6 114 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TMEM189A5PLL7 270 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 C5orf58C9J3I9 102 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PPP5D1E7EU14 171 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ZNF670-ZNF695F2Z2N8 137 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 I3L2K1 104 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 KPNA4O00629 521 aaPredicted RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 NIPSNAP2O75323 286 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ATP5HO75947 161 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ATG12O94817 140 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 RPP14O95059 124 aaKnown RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 IFNA14P01570 189 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 APODP05090 189 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 SAA1P0DJI8 122 aaPredicted RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 SLC25A6P12236 298 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 COX4I1P13073 169 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ACYP2P14621 99 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 SPRR2EP22531 72 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 CRYGSP22914 178 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 GCHFRP30047 84 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 S100A11P31949 105 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 SPRR2AP35326 72 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 GTF2A1P52655 376 aaPredicted RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 DNAJB13P59910 316 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ARF6P62330 175 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 BLCAPP62952 87 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 GNG3P63215 75 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PTRHD1Q6GMV3 140 aaKnown RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 OR2T2Q6IF00 324 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 DHRS4L2Q6PKH6 230 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 UBE2DNLQ8IWF7 75 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 IFT20Q8IY31 132 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 Q8IZM0 81 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 C20orf197Q8N268 126 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TMEM229BQ8NBD8 167 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 OR4S1Q8NGB4 309 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 OR4B1Q8NGF8 309 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 OR5H6Q8NGV6 325 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 GRPEL2Q8TAA5 225 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 BRK1Q8WUW1 75 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 IFI27L1Q96BM0 104 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PPP1R14BQ96C90 147 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PRELID3AQ96N28 172 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 HOPXQ9BPY8 73 aaPredicted RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 GINS3Q9BRX5 216 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 NMNAT1Q9HAN9 279 aaPredicted RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 LYRM2Q9NU23 88 aaPredicted RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TMEM242Q9NWH2 141 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 IL20Q9NYY1 176 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 SLC22A13Q9Y226 551 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PDZD2O15018 2839 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 NEBP20929 6669 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PLXNB2O15031 1838 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ZNF236Q9UL36 1845 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 TENM2Q9NT68 2774 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms