RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 OCC1Q8TAD7 63 aa5□□□□□ -1.61
CDH13-209ENST00000567109 CCDC168Q8NDH2 2452 aa5□□□□□ -1.61
CDH13-209ENST00000567109 LRCOL1A6NCL2 159 aa5□□□□□ -1.61
CDH13-209ENST00000567109 WT1P19544 449 aaPredicted RBP5□□□□□ -1.61
CDH13-209ENST00000567109 TMEM258P61165 79 aa5□□□□□ -1.61
CDH13-209ENST00000567109 TMEM14BQ9NUH8 114 aa5□□□□□ -1.61
CDH13-209ENST00000567109 IGHV3-38A0A0C4DH36 116 aa5□□□□□ -1.61
CDH13-209ENST00000567109 PROK2Q9HC23 129 aa5□□□□□ -1.61
CDH13-209ENST00000567109 HIGD1BQ9P298 99 aa5□□□□□ -1.61
CDH13-209ENST00000567109 TRACP01848 142 aa5□□□□□ -1.61
CDH13-209ENST00000567109 DEFB113Q30KQ7 82 aa5□□□□□ -1.61
CDH13-209ENST00000567109 LYPD2Q6UXB3 125 aa5□□□□□ -1.61
CDH13-209ENST00000567109 PRORYQ9H606 182 aa5□□□□□ -1.61
CDH13-209ENST00000567109 MRPL36Q9P0J6 103 aaKnown RBP5□□□□□ -1.61
CDH13-209ENST00000567109 HIVEP2P31629 2446 aa5□□□□□ -1.61
CDH13-209ENST00000567109 ATP6V0E1O15342 81 aa5□□□□□ -1.61
CDH13-209ENST00000567109 SEM1Q6ZVN7 128 aa5□□□□□ -1.61
CDH13-209ENST00000567109 ICOSQ9Y6W8 199 aa5□□□□□ -1.61
CDH13-209ENST00000567109 RNASE2P10153 161 aaKnown RBP5□□□□□ -1.61
CDH13-209ENST00000567109 HLA-DRB4P13762 266 aa5□□□□□ -1.61
CDH13-209ENST00000567109 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
CDH13-209ENST00000567109 C14orf132Q9NPU4 83 aa5□□□□□ -1.61
CDH13-209ENST00000567109 HLA-DRB4X5D2U9 266 aa5□□□□□ -1.61
CDH13-209ENST00000567109 ANKRD39Q53RE8 183 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 IGFL4Q6B9Z1 124 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 OR11H6Q8NGC7 330 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 SIGLEC8Q9NYZ4 499 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 IGKV1D-43A0A0B4J1Z2 117 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 TRAV13-2A0A0B4J235 113 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 SPART-AS1P0CW21 52 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 FUSP35637 526 aaKnown RBP eCLIP4.99□□□□□ -1.61
CDH13-209ENST00000567109 C10orf55Q5SWW7 151 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 SRRM5B3KS81 715 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 COL4A3Q01955 1670 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 C9JAW5 83 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 SMKR1H3BMG3 65 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 GP9P14770 177 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 PRB1P04280 392 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 CFHR4Q92496 578 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 FAM215AQ9Y5M1 114 aa4.99□□□□□ -1.61
CDH13-209ENST00000567109 GPHB5Q86YW7 130 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 hDV102S1A0JD36 115 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 RHOHQ15669 191 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 STPG4Q8N801 248 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 IGHV4-28A0A0C4DH34 117 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 Q6ZWC4 215 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 SH2D6Q7Z4S9 175 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 IGLL5B9A064 214 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 GTSF1Q8WW33 167 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 GAFA1Q96PS6 74 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 IGKV1-9A0A0C4DH69 117 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 A0A1W2PPI3 338 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 ZNF134P52741 427 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 KIR3DS1Q14943 382 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 TREML4Q6UXN2 200 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 Q6ZVH6 145 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 SPATA12Q7Z6I5 190 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 VPREB3Q9UKI3 123 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 F6UB75 175 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 PIFOQ8TCI5 191 aa4.98□□□□□ -1.61
CDH13-209ENST00000567109 IGHV1OR15-1A0A075B7D0 117 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 Q6ZSR3 168 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 TP53TG1Q9Y2A0 90 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 H3BQ85 93 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 ARMS2P0C7Q2 107 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 IGKV1D-13A0A0B4J2D9 117 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 IGKV1-13P0DP09 117 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 C18orf32Q8TCD1 76 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 GPR179Q6PRD1 2367 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 LRRK2Q5S007 2527 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 UTF1Q5T230 341 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 TMEM141Q96I45 108 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 KLHDC3Q9BQ90 382 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 A0A0A6YYD4 124 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 SMIM27A0A1W2PRY6 76 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 NDUFA4O00483 81 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 CRYGCP07315 174 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 V9GYY9 64 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 GAGE12HA6NDE8 117 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 C8orf86Q6ZUL3 223 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 NUP35Q8NFH5 326 aa4.97□□□□□ -1.61
CDH13-209ENST00000567109 HERVK_113P63121 156 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 MRPL23Q16540 153 aaKnown RBP4.96□□□□□ -1.61
CDH13-209ENST00000567109 LYZL4Q96KX0 146 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 IGHV3-30P01768 117 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 IGHV3-33P01772 117 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 SPINK8P0C7L1 97 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 IGHV3-30-3P0DP02 117 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 DAZAP2Q15038 168 aaPredicted RBP4.96□□□□□ -1.61
CDH13-209ENST00000567109 CD177Q8N6Q3 437 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 C17orf77Q96MU5 243 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 CAMK2N2Q96S95 79 aa4.96□□□□□ -1.61
CDH13-209ENST00000567109 A0A1W2PPM0 123 aa4.96□□□□□ -1.62
CDH13-209ENST00000567109 NDUFB8O95169 186 aa4.96□□□□□ -1.62
CDH13-209ENST00000567109 GYPEP15421 78 aa4.96□□□□□ -1.62
CDH13-209ENST00000567109 DEFB136Q30KP8 78 aa4.96□□□□□ -1.62
CDH13-209ENST00000567109 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.96□□□□□ -1.62
CDH13-209ENST00000567109 TMEM75Q8N9X5 138 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms