RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 MAP1LC3AQ9H492 121 aa14.16□□□□□ -0.14
MSLN-207ENST00000566549 MXRA5Q9NR99 2828 aa14.16□□□□□ -0.14
MSLN-207ENST00000566549 HBDP02042 147 aa14.16□□□□□ -0.14
MSLN-207ENST00000566549 CYB5R2Q6BCY4 276 aa14.16□□□□□ -0.14
MSLN-207ENST00000566549 LINC00477Q96M19 166 aa14.16□□□□□ -0.14
MSLN-207ENST00000566549 OVOL1O14753 267 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 ZNF25P17030 456 aaPredicted RBP14.15□□□□□ -0.14
MSLN-207ENST00000566549 WFDC12Q8WWY7 111 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 ST20Q9HBF5 79 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 SMPXQ9UHP9 88 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 DOPEY2Q9Y3R5 2298 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 RNASE4P34096 147 aaKnown RBP14.15□□□□□ -0.14
MSLN-207ENST00000566549 TCTAP57738 103 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 C18orf15Q96N68 181 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 PPP1R14DQ9NXH3 145 aa14.15□□□□□ -0.14
MSLN-207ENST00000566549 PPBPP02775 128 aa14.14□□□□□ -0.15
MSLN-207ENST00000566549 CACNG7P62955 275 aa14.14□□□□□ -0.15
MSLN-207ENST00000566549 COL5A1-AS1Q5SY13 56 aa14.14□□□□□ -0.15
MSLN-207ENST00000566549 ZNF469Q96JG9 3925 aaPredicted RBP14.13□□□□□ -0.15
MSLN-207ENST00000566549 M0R381 172 aa14.13□□□□□ -0.15
MSLN-207ENST00000566549 SMIM15Q7Z3B0 74 aa14.13□□□□□ -0.15
MSLN-207ENST00000566549 BEX4Q9NWD9 120 aaPredicted RBP14.13□□□□□ -0.15
MSLN-207ENST00000566549 IGHV4-31P0DP07 118 aa14.13□□□□□ -0.15
MSLN-207ENST00000566549 DUX5Q96PT3 197 aa14.13□□□□□ -0.15
MSLN-207ENST00000566549 MRPS16Q9Y3D3 137 aaKnown RBP14.13□□□□□ -0.15
MSLN-207ENST00000566549 LENEPQ9Y5L5 61 aa14.13□□□□□ -0.15
MSLN-207ENST00000566549 J3QLI3 93 aa14.12□□□□□ -0.15
MSLN-207ENST00000566549 S100A4P26447 101 aaKnown RBP14.12□□□□□ -0.15
MSLN-207ENST00000566549 TRAV21A0A0B4J279 112 aa14.12□□□□□ -0.15
MSLN-207ENST00000566549 LEPP41159 167 aa14.12□□□□□ -0.15
MSLN-207ENST00000566549 GOLT1BQ9Y3E0 138 aa14.12□□□□□ -0.15
MSLN-207ENST00000566549 CREBBPQ92793 2442 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 ANXA2RQ3ZCQ2 193 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 Q5PR19 223 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 SCRT2Q9NQ03 307 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 SNAI2O43623 268 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 SLC25A34Q6PIV7 304 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 IFI27L1Q96BM0 104 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 VPREB3Q9UKI3 123 aa14.11□□□□□ -0.15
MSLN-207ENST00000566549 HOXA3O43365 443 aaPredicted RBP14.1□□□□□ -0.15
MSLN-207ENST00000566549 OR2K2Q8NGT1 345 aa14.1□□□□□ -0.15
MSLN-207ENST00000566549 GNRH2O43555 120 aa14.1□□□□□ -0.15
MSLN-207ENST00000566549 TEX15Q9BXT5 2789 aa14.1□□□□□ -0.15
MSLN-207ENST00000566549 Q6ZVH6 145 aa14.09□□□□□ -0.15
MSLN-207ENST00000566549 TMEM208Q9BTX3 173 aa14.09□□□□□ -0.15
MSLN-207ENST00000566549 K7EMT4 169 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 ZNF688P0C7X2 276 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 ASIPP42127 132 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 SYNJ2BPP57105 145 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 DEFB113Q30KQ7 82 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 DCANP1Q8TF63 244 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 FAM19A4Q96LR4 140 aa14.08□□□□□ -0.16
MSLN-207ENST00000566549 NXT2Q9NPJ8 142 aaKnown RBP14.08□□□□□ -0.16
MSLN-207ENST00000566549 PHLDA3Q9Y5J5 127 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 IGKV3-20P01619 116 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 MPV17L2Q567V2 206 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 Q6YL49 198 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 NRACQ8N912 160 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 TMEM158Q8WZ71 300 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 Q96MF0 132 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 MS4A6AQ9H2W1 248 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 ZNF580Q9UK33 172 aa14.07□□□□□ -0.16
MSLN-207ENST00000566549 IGHV4-4A0A075B6R2 117 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 ANKRD39Q53RE8 183 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 PSMG4Q5JS54 123 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 C14orf178Q8N769 122 aaPredicted RBP14.06□□□□□ -0.16
MSLN-207ENST00000566549 ZNF702PQ9H963 129 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 DKK2Q9UBU2 259 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 TMEM238LA0A1B0GVL6 79 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 LGALS9BQ3B8N2 356 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 LGALS9CQ6DKI2 356 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 TLN2Q9Y4G6 2542 aa14.06□□□□□ -0.16
MSLN-207ENST00000566549 FCER1GP30273 86 aa14.05□□□□□ -0.16
MSLN-207ENST00000566549 ID1P41134 155 aa14.05□□□□□ -0.16
MSLN-207ENST00000566549 IGHV4OR15-8A0A075B7B6 117 aa14.05□□□□□ -0.16
MSLN-207ENST00000566549 A0A087WW49 117 aa14.05□□□□□ -0.16
MSLN-207ENST00000566549 FSHBP01225 129 aa14.05□□□□□ -0.16
MSLN-207ENST00000566549 Q8N8P6 123 aa14.05□□□□□ -0.16
MSLN-207ENST00000566549 ZNF124Q15973 351 aa14.04□□□□□ -0.16
MSLN-207ENST00000566549 APCP25054 2843 aa14.04□□□□□ -0.16
MSLN-207ENST00000566549 IGLV2-18A0A075B6J9 118 aa14.04□□□□□ -0.16
MSLN-207ENST00000566549 NUDT3O95989 172 aa14.04□□□□□ -0.16
MSLN-207ENST00000566549 MGPP08493 103 aa14.03□□□□□ -0.16
MSLN-207ENST00000566549 LINC01546A6NGU7 62 aa14.03□□□□□ -0.16
MSLN-207ENST00000566549 NPSP0C0P6 89 aa14.03□□□□□ -0.16
MSLN-207ENST00000566549 RNASE3P12724 160 aaKnown RBP14.03□□□□□ -0.16
MSLN-207ENST00000566549 DEFB136Q30KP8 78 aa14.03□□□□□ -0.16
MSLN-207ENST00000566549 HIST2H2BDQ6DRA6 164 aa14.03□□□□□ -0.16
MSLN-207ENST00000566549 TRAV12-3A0A0B4J271 114 aa14.02□□□□□ -0.16
MSLN-207ENST00000566549 CD5LO43866 347 aa14.02□□□□□ -0.16
MSLN-207ENST00000566549 PRSS1P07477 247 aa14.02□□□□□ -0.16
MSLN-207ENST00000566549 LGALS1P09382 135 aaKnown RBP14.02□□□□□ -0.16
MSLN-207ENST00000566549 COX8AP10176 69 aa14.02□□□□□ -0.16
MSLN-207ENST00000566549 HOXD3P31249 432 aaPredicted RBP14.02□□□□□ -0.16
MSLN-207ENST00000566549 C18orf65Q6ZTR6 163 aa14.02□□□□□ -0.16
MSLN-207ENST00000566549 DLEU1O43261 78 aa14.02□□□□□ -0.17
MSLN-207ENST00000566549 APRG1Q8IVJ8 170 aa14.02□□□□□ -0.17
MSLN-207ENST00000566549 RPL39LQ96EH5 51 aaKnown RBP14.02□□□□□ -0.17
MSLN-207ENST00000566549 CR1P17927 2039 aa14.01□□□□□ -0.17
MSLN-207ENST00000566549 MYO9AB2RTY4 2548 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms