RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 NRACQ8N912 160 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 DEFB1P60022 68 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 PRR9Q5T870 116 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 C5orf56Q8N8D9 126 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 S100A4P26447 101 aaKnown RBP10.88□□□□□ -0.67
CDH1-209ENST00000566510 NHP2Q9NX24 153 aaKnown RBP10.88□□□□□ -0.67
CDH1-209ENST00000566510 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
CDH1-209ENST00000566510 TRAV41A0A0B4J266 112 aa10.88□□□□□ -0.67
CDH1-209ENST00000566510 RIPPLY3P57055 190 aa10.88□□□□□ -0.67
CDH1-209ENST00000566510 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH1-209ENST00000566510 ARL3P36405 182 aa10.87□□□□□ -0.67
CDH1-209ENST00000566510 LMO4P61968 165 aa10.87□□□□□ -0.67
CDH1-209ENST00000566510 BRD3OSQ6XYD6 125 aa10.87□□□□□ -0.67
CDH1-209ENST00000566510 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
CDH1-209ENST00000566510 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
CDH1-209ENST00000566510 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
CDH1-209ENST00000566510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDH1-209ENST00000566510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.86□□□□□ -0.67
CDH1-209ENST00000566510 TRBV12-3P01733 135 aa10.86□□□□□ -0.67
CDH1-209ENST00000566510 UNQ9165/PRO28630Q6UXU0 137 aa10.86□□□□□ -0.67
CDH1-209ENST00000566510 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
CDH1-209ENST00000566510 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
CDH1-209ENST00000566510 MRPL53Q96EL3 112 aaKnown RBP10.86□□□□□ -0.67
CDH1-209ENST00000566510 HIGD1BQ9P298 99 aa10.86□□□□□ -0.67
CDH1-209ENST00000566510 IGHV3-11P01762 117 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 C14orf178Q8N769 122 aaPredicted RBP10.85□□□□□ -0.67
CDH1-209ENST00000566510 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 A0A087WX48 190 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 MGPP08493 103 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 UCNP55089 124 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 PHLDA3Q9Y5J5 127 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 U3KQE9 123 aa10.85□□□□□ -0.67
CDH1-209ENST00000566510 LY6EQ16553 131 aa10.84□□□□□ -0.67
CDH1-209ENST00000566510 CEND1Q8N111 149 aa10.84□□□□□ -0.67
CDH1-209ENST00000566510 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
CDH1-209ENST00000566510 RNASE4P34096 147 aaKnown RBP10.84□□□□□ -0.67
CDH1-209ENST00000566510 C9orf139Q6ZV77 190 aa10.84□□□□□ -0.67
CDH1-209ENST00000566510 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
CDH1-209ENST00000566510 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
CDH1-209ENST00000566510 F6UB75 175 aa10.83□□□□□ -0.68
CDH1-209ENST00000566510 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
CDH1-209ENST00000566510 LY6DQ14210 128 aa10.83□□□□□ -0.68
CDH1-209ENST00000566510 RPL39LQ96EH5 51 aaKnown RBP10.83□□□□□ -0.68
CDH1-209ENST00000566510 SCGB3A1Q96QR1 104 aa10.83□□□□□ -0.68
CDH1-209ENST00000566510 HIST1H4GQ99525 98 aa10.83□□□□□ -0.68
CDH1-209ENST00000566510 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
CDH1-209ENST00000566510 CSTL1Q9H114 145 aa10.83□□□□□ -0.68
CDH1-209ENST00000566510 PLNP26678 52 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 KLK9Q2XQG4 91 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 DEFB104AQ8WTQ1 72 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 KLK9Q9UKQ9 250 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 IGHV4-4A0A075B6R2 117 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 ASIPP42127 132 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
CDH1-209ENST00000566510 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
CDH1-209ENST00000566510 G3V4G9 280 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 SRD5A1P18405 259 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 ANXA2RQ3ZCQ2 193 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 LCNL1Q6ZST4 164 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 H7C1H1 209 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 GNRH2O43555 120 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 ITLN2Q8WWU7 325 aaPredicted RBP10.81□□□□□ -0.68
CDH1-209ENST00000566510 RASL10AQ92737 203 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 CHTOPQ9Y3Y2 248 aaKnown RBP10.81□□□□□ -0.68
CDH1-209ENST00000566510 ORMDL2Q53FV1 153 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 GPHB5Q86YW7 130 aa10.81□□□□□ -0.68
CDH1-209ENST00000566510 F8VRH5 84 aa10.8□□□□□ -0.68
CDH1-209ENST00000566510 PF4V1P10720 104 aa10.8□□□□□ -0.68
CDH1-209ENST00000566510 NEGR1Q7Z3B1 354 aa10.8□□□□□ -0.68
CDH1-209ENST00000566510 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
CDH1-209ENST00000566510 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
CDH1-209ENST00000566510 WFDC12Q8WWY7 111 aa10.8□□□□□ -0.68
CDH1-209ENST00000566510 OR11H12B2RN74 326 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 OVOL1O14753 267 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 OR11H1Q8NG94 326 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 OR11H2Q8NH07 326 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 CSPG4Q6UVK1 2322 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 CRYBG3Q68DQ2 2970 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 IGHV1-69DA0A0B4J2H0 117 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 IGHV1-69P01742 117 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 SCGB2A2Q13296 93 aa10.79□□□□□ -0.68
CDH1-209ENST00000566510 PHLDA1Q8WV24 401 aaPredicted RBP10.79□□□□□ -0.68
CDH1-209ENST00000566510 C19orf84I3L1E1 186 aa10.78□□□□□ -0.68
CDH1-209ENST00000566510 NDUFA4O00483 81 aa10.78□□□□□ -0.68
CDH1-209ENST00000566510 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
CDH1-209ENST00000566510 TOMM6Q96B49 74 aa10.78□□□□□ -0.68
CDH1-209ENST00000566510 MUC4Q99102 2169 aa10.77□□□□□ -0.68
CDH1-209ENST00000566510 IGHV4-39P01824 125 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 C12orf74Q32Q52 190 aa10.77□□□□□ -0.69
CDH1-209ENST00000566510 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms