RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NFE4Q86UQ8 179 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 TCTE3Q8IZS6 198 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 LENEPQ9Y5L5 61 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 LY96Q9Y6Y9 160 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 TRAV9-2A0A087WT02 112 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 K7EP13 123 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 EREGO14944 169 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 GNRH2O43555 120 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 OR7C2O60412 319 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 EIF3GO75821 320 aaKnown RBP eCLIP5.79□□□□□ -1.48
CAPN3-213ENST00000565173 GYPEP15421 78 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 ATP6V0CP27449 155 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 SRIP30626 198 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 ZNF345Q14585 488 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 TMEM183BQ1AE95 376 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 ACOT6Q3I5F7 207 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-213ENST00000565173 TMEM183AQ8IXX5 376 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 KCNRGQ8N5I3 272 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 TMED6Q8WW62 240 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 TVP23CQ96ET8 276 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 SPXQ9BT56 116 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 SH3BGRL3Q9H299 93 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 MSRB1Q9NZV6 116 aa5.79□□□□□ -1.48
CAPN3-213ENST00000565173 TRAV4A0A0B4J268 109 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 A0A0D9SG52 128 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 LOC100131303A0A0U1RQF7 123 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 KANTRA0A1W2PQU2 76 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 PFDN1O60925 122 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 C1QBP02746 253 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 ORM1P02763 201 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 RAB2AP61019 212 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 UBE2L3P68036 154 aaKnown RBP5.78□□□□□ -1.48
CAPN3-213ENST00000565173 FAM159AQ6UWV7 190 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 PSMG3Q9BT73 122 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-213ENST00000565173 CYTL1Q9NRR1 136 aa5.78□□□□□ -1.48
CAPN3-213ENST00000565173 TRGV11A0A075B6L2 103 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 A0A1W2PPV4 95 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 PGPA6NDG6 321 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 C9JCJ5 164 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 BCL2L11O43521 198 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 CRYGDP07320 174 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 INAFM2P0DMQ5 153 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 EVI2AP22794 236 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 SERF2P84101 59 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 ZFP69Q49AA0 526 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 TMUB2Q71RG4 321 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 OR10G9Q8NGN4 311 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 OR10G7Q8NGN6 311 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 OR2G3Q8NGZ4 309 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 PCNPQ8WW12 178 aaKnown RBP5.77□□□□□ -1.49
CAPN3-213ENST00000565173 HYLS1Q96M11 299 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 ZNF471Q9BX82 626 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-213ENST00000565173 OTORQ9NRC9 128 aa5.77□□□□□ -1.49
CAPN3-213ENST00000565173 DMBT1Q9UGM3 2413 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-213ENST00000565173 TRAV8-1A0A0A6YYK1 113 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 LRCOL1A6NCL2 159 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 M0R2P5 195 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 MBP02144 154 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 TYMSP04818 313 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-213ENST00000565173 GCSHP23434 173 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 TIRAPP58753 221 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 TAS2R45P59539 299 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 EIF5AP63241 154 aaKnown RBP5.76□□□□□ -1.49
CAPN3-213ENST00000565173 KHDC3LQ587J8 217 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 Q5VSD8 79 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 ARL6IP6Q8N6S5 226 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 OR4C5Q8NGB2 326 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 TXNDC17Q9BRA2 123 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 NAGKQ9UJ70 344 aa5.76□□□□□ -1.49
CAPN3-213ENST00000565173 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 IBA57-AS1B1ANH7 110 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 F6UZH7 168 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 HMGB3O15347 200 aaKnown RBP5.75□□□□□ -1.49
CAPN3-213ENST00000565173 SMR3BP02814 79 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-213ENST00000565173 CDC34P49427 236 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-213ENST00000565173 LGALSLQ3ZCW2 172 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-213ENST00000565173 AKR1C8PQ5T2L2 129 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 DPPA3Q6W0C5 159 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 GOLT1AQ6ZVE7 132 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 ACTR3CQ9C0K3 210 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-213ENST00000565173 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
CAPN3-213ENST00000565173 IGHV3-38A0A0C4DH36 116 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 TPT1P13693 172 aaKnown RBP5.74□□□□□ -1.49
CAPN3-213ENST00000565173 ZNF80P51504 273 aaPredicted RBP5.74□□□□□ -1.49
CAPN3-213ENST00000565173 GNG5P63218 68 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 LINC01556Q5JQF7 62 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 CFAP126Q5VTH2 177 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 PQLC2Q6ZP29 291 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 SH2D6Q7Z4S9 175 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 C9orf62Q8N4C0 152 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 C10orf126Q8N4M7 172 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 SLC25A29Q8N8R3 303 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 CMTM2Q8TAZ6 248 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 FRZBQ92765 325 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 RAB24Q969Q5 203 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 SDF2L1Q9HCN8 221 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 TREM1Q9NP99 234 aa5.74□□□□□ -1.49
CAPN3-213ENST00000565173 RPH3ALQ9UNE2 315 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms