RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 ORM1P02763 201 aa19.5■□□□□ 0.71
SH3GL3-205ENST00000563901 PYGO2Q9BRQ0 406 aa19.5■□□□□ 0.71
SH3GL3-205ENST00000563901 TP53TG1Q9Y2A0 90 aa19.5■□□□□ 0.71
SH3GL3-205ENST00000563901 TMSB15BA0A087X1C1 80 aa19.49■□□□□ 0.71
SH3GL3-205ENST00000563901 FAM159AQ6UWV7 190 aa19.49■□□□□ 0.71
SH3GL3-205ENST00000563901 CBY3A6NI87 242 aa19.48■□□□□ 0.71
SH3GL3-205ENST00000563901 GNRH2O43555 120 aa19.48■□□□□ 0.71
SH3GL3-205ENST00000563901 SEC11CQ9BY50 192 aa19.48■□□□□ 0.71
SH3GL3-205ENST00000563901 DEFB4AO15263 64 aa19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 S100A1P23297 94 aa19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 NUDT10Q8NFP7 164 aa19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 ISOC2Q96AB3 205 aa19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 NUDT11Q96G61 164 aa19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 TYMSP04818 313 aa19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 DAZAP1Q96EP5 407 aaKnown RBP19.47■□□□□ 0.71
SH3GL3-205ENST00000563901 B4DEV8 164 aa19.46■□□□□ 0.71
SH3GL3-205ENST00000563901 KRBOX1C9JBD0 128 aa19.46■□□□□ 0.71
SH3GL3-205ENST00000563901 RRN3P1Q2M238 152 aa19.46■□□□□ 0.71
SH3GL3-205ENST00000563901 ZNF575Q86XF7 245 aa19.46■□□□□ 0.71
SH3GL3-205ENST00000563901 BIN3Q9NQY0 253 aa19.46■□□□□ 0.71
SH3GL3-205ENST00000563901 ERVFC1-1P60608 527 aa19.45■□□□□ 0.7
SH3GL3-205ENST00000563901 TDRG1Q3Y452 100 aa19.45■□□□□ 0.7
SH3GL3-205ENST00000563901 LINC01559Q495D7 138 aa19.45■□□□□ 0.7
SH3GL3-205ENST00000563901 IBA57Q5T440 356 aaKnown RBP19.45■□□□□ 0.7
SH3GL3-205ENST00000563901 ZMAT4Q9H898 229 aa19.45■□□□□ 0.7
SH3GL3-205ENST00000563901 IGHV4-28A0A0C4DH34 117 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 GRIFINA4D1Z8 144 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 P01737 135 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 C10orf91Q5T1B1 145 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 Q8NAQ8 132 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 NEU1Q99519 415 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 LINC00467Q9BRT7 94 aa19.44■□□□□ 0.7
SH3GL3-205ENST00000563901 MDFICQ9P1T7 246 aa19.43■□□□□ 0.7
SH3GL3-205ENST00000563901 EMP1P54849 157 aa19.43■□□□□ 0.7
SH3GL3-205ENST00000563901 OR2D3Q8NGH3 330 aa19.43■□□□□ 0.7
SH3GL3-205ENST00000563901 RNASE8Q8TDE3 154 aaKnown RBP19.43■□□□□ 0.7
SH3GL3-205ENST00000563901 TMEM189A5PLL7 270 aa19.42■□□□□ 0.7
SH3GL3-205ENST00000563901 GZMBP10144 247 aa19.42■□□□□ 0.7
SH3GL3-205ENST00000563901 SFRP2Q96HF1 295 aa19.42■□□□□ 0.7
SH3GL3-205ENST00000563901 KCNS1Q96KK3 526 aa19.42■□□□□ 0.7
SH3GL3-205ENST00000563901 CARHSP1Q9Y2V2 147 aaKnown RBP19.42■□□□□ 0.7
SH3GL3-205ENST00000563901 PLAC8L1A1L4L8 177 aa19.41■□□□□ 0.7
SH3GL3-205ENST00000563901 SMIM9A6NGZ8 99 aa19.41■□□□□ 0.7
SH3GL3-205ENST00000563901 FAM231DQ6ZW35 169 aa19.41■□□□□ 0.7
SH3GL3-205ENST00000563901 C11orf72Q8NBR9 251 aa19.41■□□□□ 0.7
SH3GL3-205ENST00000563901 GSN-AS1Q9NRJ2 163 aa19.41■□□□□ 0.7
SH3GL3-205ENST00000563901 MIFP14174 115 aa19.4■□□□□ 0.7
SH3GL3-205ENST00000563901 TMEM263Q8WUH6 116 aaKnown RBP19.4■□□□□ 0.7
SH3GL3-205ENST00000563901 RPP21Q9H633 154 aaKnown RBP19.4■□□□□ 0.7
SH3GL3-205ENST00000563901 IGHV3-16A0A0C4DH30 117 aa19.4■□□□□ 0.7
SH3GL3-205ENST00000563901 GATCO43716 136 aaKnown RBP19.39■□□□□ 0.69
SH3GL3-205ENST00000563901 PNRC1Q12796 327 aaPredicted RBP19.39■□□□□ 0.69
SH3GL3-205ENST00000563901 C16orf74Q96GX8 76 aa19.39■□□□□ 0.69
SH3GL3-205ENST00000563901 OSTCQ9NRP0 149 aa19.39■□□□□ 0.69
SH3GL3-205ENST00000563901 TIMM8BQ9Y5J9 83 aaPredicted RBP19.39■□□□□ 0.69
SH3GL3-205ENST00000563901 TRGV11A0A075B6L2 103 aa19.38■□□□□ 0.69
SH3GL3-205ENST00000563901 APOC3P02656 99 aa19.37■□□□□ 0.69
SH3GL3-205ENST00000563901 OR10G8Q8NGN5 311 aa19.37■□□□□ 0.69
SH3GL3-205ENST00000563901 V9GYV3 84 aa19.37■□□□□ 0.69
SH3GL3-205ENST00000563901 H3BVH4 76 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 NHLRC4P0CG21 123 aaPredicted RBP19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 RNASE3P12724 160 aaKnown RBP19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 MUC4Q99102 2169 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 A0A0J9YWU9 116 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 ASIPP42127 132 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 ZNF415Q09FC8 603 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 RNF212Q495C1 297 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 C15orf54Q8N8G6 183 aa19.36■□□□□ 0.69
SH3GL3-205ENST00000563901 ZNF493Q6ZR52 646 aa19.35■□□□□ 0.69
SH3GL3-205ENST00000563901 S100A4P26447 101 aaKnown RBP19.34■□□□□ 0.69
SH3GL3-205ENST00000563901 IL17DQ8TAD2 202 aa19.34■□□□□ 0.69
SH3GL3-205ENST00000563901 NOP10Q9NPE3 64 aaKnown RBP19.34■□□□□ 0.69
SH3GL3-205ENST00000563901 TCL1AP56279 114 aa19.33■□□□□ 0.69
SH3GL3-205ENST00000563901 SNURFLB1AK76 121 aa19.33■□□□□ 0.68
SH3GL3-205ENST00000563901 ARMS2P0C7Q2 107 aa19.33■□□□□ 0.68
SH3GL3-205ENST00000563901 CELA1Q9UNI1 258 aa19.33■□□□□ 0.68
SH3GL3-205ENST00000563901 MUC21A0A0G2JKD1 596 aa19.32■□□□□ 0.68
SH3GL3-205ENST00000563901 MUC21A0A140T8X8 626 aa19.32■□□□□ 0.68
SH3GL3-205ENST00000563901 CLRN3Q8NCR9 226 aa19.32■□□□□ 0.68
SH3GL3-205ENST00000563901 GTSF1Q8WW33 167 aa19.32■□□□□ 0.68
SH3GL3-205ENST00000563901 C9orf85Q96MD7 179 aa19.32■□□□□ 0.68
SH3GL3-205ENST00000563901 TPPP3Q9BW30 176 aa19.32■□□□□ 0.68
SH3GL3-205ENST00000563901 RPS20P60866 119 aaKnown RBP19.31■□□□□ 0.68
SH3GL3-205ENST00000563901 DNLZQ5SXM8 178 aa19.31■□□□□ 0.68
SH3GL3-205ENST00000563901 C11orf68Q9H3H3 251 aaKnown RBP19.3■□□□□ 0.68
SH3GL3-205ENST00000563901 U3KQK5 164 aa19.3■□□□□ 0.68
SH3GL3-205ENST00000563901 CXCL1P09341 107 aa19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 FAM222AQ5U5X8 452 aa19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 MRPL16Q9NX20 251 aaKnown RBP19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 IL36BQ9NZH7 164 aa19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 IGLC6P0CF74 106 aa19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 SSTP61278 116 aa19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 CT83Q5H943 113 aa19.29■□□□□ 0.68
SH3GL3-205ENST00000563901 XKRY2A2RUG3 117 aa19.28■□□□□ 0.68
SH3GL3-205ENST00000563901 A8MWL6 223 aa19.28■□□□□ 0.68
SH3GL3-205ENST00000563901 MT-ND4LP03901 98 aa19.28■□□□□ 0.68
SH3GL3-205ENST00000563901 Q6ZTI0 123 aa19.28■□□□□ 0.68
SH3GL3-205ENST00000563901 FER1L6-AS1Q8NA97 138 aa19.28■□□□□ 0.68
SH3GL3-205ENST00000563901 DKK2Q9UBU2 259 aa19.28■□□□□ 0.68
SH3GL3-205ENST00000563901 C7orf77A4D0Y5 90 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms