RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 LOC107984156A0A0G2JMH3 177 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 TNFRSF6BO95407 300 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 NPYP01303 97 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 SRSF1Q07955 248 aaKnown RBP eCLIP8.13□□□□□ -1.119e-10■□□□□ 8.7
RNF40-204ENST00000563683 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
RNF40-204ENST00000563683 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 ARL17AQ8IVW1 177 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 PIP4P2Q8N4L2 257 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 FANCD2OSQ96PS1 177 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 MSRB1Q9NZV6 116 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 SYT8Q8NBV8 401 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 FOXI2Q6ZQN5 318 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 C9orf139Q6ZV77 190 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 C11orf44Q8N8P7 122 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 IGHV1-69DA0A0B4J2H0 117 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 DPM2O94777 84 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 IGHV1-69P01742 117 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 Q8N9W7 124 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 NPBQ8NG41 125 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
RNF40-204ENST00000563683 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
RNF40-204ENST00000563683 H7C2G1 150 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 FXYD2P54710 66 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 CKS1BP61024 79 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 POLQO75417 2590 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 TRAV12-3A0A0B4J271 114 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 OVOL1O14753 267 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 IGKCP01834 107 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 C1orf122Q6ZSJ8 110 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 LRRK2Q5S007 2527 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 B4DSR2 109 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 PSMB2P49721 201 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 AGPAT4-IT1Q9H0P7 198 aa8.12□□□□□ -1.11
RNF40-204ENST00000563683 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
RNF40-204ENST00000563683 LAGE3Q14657 143 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 CDSNQ15517 529 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 CEND1Q8N111 149 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 ZNF479Q96JC4 524 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 DKK2Q9UBU2 259 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 CENPVL3A0A0U1RRI6 287 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 PRAC2D3DTV9 90 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
RNF40-204ENST00000563683 TCTEX1D4Q5JR98 221 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 E9PLD3 99 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 PRSS2P07478 247 aa8.11□□□□□ -1.11
RNF40-204ENST00000563683 F6UB75 175 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 TAL2Q16559 108 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 LINC00477Q96M19 166 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 BOD1L1Q8NFC6 3051 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 MSMBP08118 114 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 HLA-DRB4P13762 266 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 GAGE13Q4V321 117 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 HLA-DRB4X5D2U9 266 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 LINC01548A6NM66 108 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 FBXL19-AS1Q494R0 122 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
RNF40-204ENST00000563683 IGLL5B9A064 214 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 BLCAPP62952 87 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 WFDC2Q14508 124 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 A0A087WWL8 130 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 FAM223BA6NKX1 122 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 K7ERJ3 54 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 CRYGBP07316 175 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 EMP1P54849 157 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 FAM223AQ8IWN6 122 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 ITLN2Q8WWU7 325 aaPredicted RBP8.09□□□□□ -1.11
RNF40-204ENST00000563683 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 WI2-2373I1.2A0A1W2PRP0 233 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 BUB3O43684 328 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 Q5PR19 223 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
RNF40-204ENST00000563683 APOMO95445 188 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 DEFB1P60022 68 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 PHLDA1Q8WV24 401 aaPredicted RBP8.08□□□□□ -1.12
RNF40-204ENST00000563683 DAZ1Q9NQZ3 744 aaKnown RBP8.08□□□□□ -1.12
RNF40-204ENST00000563683 SYNJ2BPP57105 145 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 ETDBQ3ZM63 59 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 CFHR4Q92496 578 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 ZMAT4Q9H898 229 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 PPP1R17O96001 155 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 CRIP1P50238 77 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 ODF1Q14990 250 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 LY6G5BQ8NDX9 201 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 SPAG8Q99932 426 aaPredicted RBP8.08□□□□□ -1.12
RNF40-204ENST00000563683 IGHV4-39P01824 125 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 IGHV4-38-2P0DP08 117 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 NRGNQ92686 78 aa8.08□□□□□ -1.12
RNF40-204ENST00000563683 DUX3Q96PT4 197 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms