RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 COL1A1P02452 1464 aaPredicted RBP2.65□□□□□ -1.99
GDE1-202ENST00000563645 LRRC37A3O60309 1634 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 IGHV3OR15-7A0A075B7D8 119 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 A0A0A6YYD4 124 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 IGKV1D-43A0A0B4J1Z2 117 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 A8MUN3 132 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 FFAR1O14842 300 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 NDUFB3O43676 98 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 LEPROTL1O95214 131 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 PPYP01298 95 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 NPYP01303 97 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 CXCL8P10145 99 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
GDE1-202ENST00000563645 NPPCP23582 126 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 PSMB2P49721 201 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 ZNF80P51504 273 aaPredicted RBP2.64□□□□□ -1.99
GDE1-202ENST00000563645 RPL30P62888 115 aaKnown RBP2.64□□□□□ -1.99
GDE1-202ENST00000563645 SUPT4H1P63272 117 aaKnown RBP2.64□□□□□ -1.99
GDE1-202ENST00000563645 NUMA1Q14980 2115 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 ZNF56Q15929 161 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 ABCA11PQ4W5N1 156 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 SDIM1Q6ZPB5 146 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 LCA10Q71F78 164 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 MARCH3Q86UD3 253 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 LINC00337Q8N6G1 96 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 RNASE6Q93091 150 aaKnown RBP2.64□□□□□ -1.99
GDE1-202ENST00000563645 ZNF492Q9P255 531 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 EPDR1Q9UM22 224 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 LY96Q9Y6Y9 160 aa2.64□□□□□ -1.99
GDE1-202ENST00000563645 PHF3Q92576 2039 aaKnown RBP2.64□□□□□ -1.99
GDE1-202ENST00000563645 ARHGAP21Q5T5U3 1957 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 SHROOM3Q8TF72 1996 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 NOTCH2Q04721 2471 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 IGLV1-36A0A0B4J1U3 117 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 MYMXA0A1B0GTQ4 84 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 UBE2L5PA0A1B0GUS4 154 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 A0A1W2PQD3 144 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 IBA57-AS1B1ANH7 110 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 C4orf51C9J302 202 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 LST1O00453 97 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 SLC25A20O43772 301 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 TIMM17BO60830 172 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 IL4P05112 153 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 ACYP1P07311 99 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 AQP1P29972 269 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 SYNJ2BPP57105 145 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 C17orf58Q2M2W7 97 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 TMEM155Q4W5P6 130 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 PHF5AQ7RTV0 110 aaKnown RBP2.63□□□□□ -1.99
GDE1-202ENST00000563645 TMEM75Q8N9X5 138 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 MORN4Q8NDC4 146 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 Q9H3A6 140 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 CALYQ9NYX4 217 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 LINC00474Q9P2X8 69 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 PAPPA2Q9BXP8 1791 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 THSD7BQ9C0I4 1608 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 NUP98P52948 1817 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 TRPM6Q9BX84 2022 aa2.63□□□□□ -1.99
GDE1-202ENST00000563645 NRXN2Q9P2S2 1712 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 ATG2BQ96BY7 2078 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 PLXNB3Q9ULL4 1909 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 TRBV7-3A0A075B6L6 115 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 TMSB15BA0A087X1C1 80 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 IGKV6D-21A0A0A0MT36 114 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 EPOPA6NHQ4 379 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 M0R381 172 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 UBE2L6O14933 153 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 HBDP02042 147 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 CCKP06307 115 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 CD70P32970 193 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 S100A3P33764 101 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 ATP5EP56381 51 aaPredicted RBP2.62□□□□□ -1.99
GDE1-202ENST00000563645 SMIM11AP58511 58 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 HBBP68871 147 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 RPL18Q07020 188 aaKnown RBP2.62□□□□□ -1.99
GDE1-202ENST00000563645 LYPD5Q6UWN5 251 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 TMEM243Q9BU79 118 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 LINC00597Q9H2U6 94 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 V9GYV3 84 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 ANAPC1Q9H1A4 1944 aa2.62□□□□□ -1.99
GDE1-202ENST00000563645 COL16A1Q07092 1604 aaPredicted RBP2.61□□□□□ -1.99
GDE1-202ENST00000563645 IGKV1D-8A0A087WSZ0 117 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 TRAV8-3A0A0A6YYJ7 113 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 TRBV7-1A0A0A6YYK4 115 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 FSTL3O95633 263 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 RNASE2P10153 161 aaKnown RBP2.61□□□□□ -1.99
GDE1-202ENST00000563645 FXYD6P3P58550 94 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 LINC00313P59037 77 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 PCBD1P61457 104 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 SERF2P84101 59 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 NSUN5P1Q3KNT7 163 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 KIAA2026Q5HYC2 2103 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 FAM104BQ5XKR9 115 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 IGFL3Q6UXB1 125 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 CLEC19AQ6UXS0 136 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 ZNF525Q8N782 197 aa2.61□□□□□ -1.99
GDE1-202ENST00000563645 ZNF491Q8N8L2 437 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms