RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZNF736B4DX44 427 aaPredicted RBP1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 H3BRM9 83 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 K7ERJ3 54 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 SSSCA1O60232 199 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 HYPMO75409 117 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 PROSCO94903 275 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 UBL3O95164 117 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 SFT2D2O95562 160 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 MT-ATP8P03928 68 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 MSMBP08118 114 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 NMBP08949 121 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 FUSP35637 526 aaKnown RBP eCLIP1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 POLR2JP52435 117 aaKnown RBP1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 PCBD1P61457 104 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 HIST1H4AP62805 103 aaKnown RBP1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 SEC11AP67812 179 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 Q0VG73 95 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 Q6ZS92 163 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 PHF5AQ7RTV0 110 aaKnown RBP1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 MORN4Q8NDC4 146 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 PMCHL2Q9BQD1 86 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 SLC35B3Q9H1N7 401 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 BCL2L10Q9HD36 194 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 OSTCQ9NRP0 149 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 DNAJC15Q9Y5T4 150 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 LINC00312Q9Y6C7 94 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 ARHGAP5Q13017 1502 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 PLIN4Q96Q06 1357 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 CFTRP13569 1480 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 FANCD2Q9BXW9 1451 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 GLI3P10071 1580 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 MYH7BA7E2Y1 1941 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 MYH13Q9UKX3 1938 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 MYH4Q9Y623 1939 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 CUL9Q8IWT3 2517 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 RGS12O14924 1447 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 ABCC5O15440 1437 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 RIC1Q4ADV7 1423 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 CASKIN1Q8WXD9 1431 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 PRDM15P57071 1507 aaPredicted RBP1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 MAGI3Q5TCQ9 1506 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 NUP210LQ5VU65 1888 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 ANKRD31Q8N7Z5 1873 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 IGLV3-9A0A075B6K5 115 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF737O75373 536 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 CFDP00746 253 aaPredicted RBP1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 C1QAP02745 245 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 GYPBP06028 91 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 COX6A1P12074 109 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 SLC25A6P12236 298 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 COX7CP15954 63 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 FAUP35544 74 aaKnown RBP1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 GNG11P61952 73 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 CIRBPQ14011 172 aaKnown RBP1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 TDRG1Q3Y452 100 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 LINC01554Q52M75 96 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 DPPA3Q6W0C5 159 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 HEPN1Q6WQI6 88 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 SLC25A26Q70HW3 274 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 Q8NDZ9 215 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 OR2T35Q8NGX2 323 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 OR10AG1Q8NH19 301 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 FAM213BQ8TBF2 198 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 TSKUQ8WUA8 353 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 SCGB3A1Q96QR1 104 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 MGST2Q99735 147 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 TAS2R4Q9NYW5 299 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 CACFD1Q9UGQ2 172 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 LSM2Q9Y333 95 aaKnown RBP1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 SPCS1Q9Y6A9 102 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 NLRP1Q9C000 1473 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 MLH3Q9UHC1 1453 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 SCN11AQ9UI33 1791 aa1.42□□□□□ -2.18
SHCBP1-202ENST00000563219 PLXNA3P51805 1871 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 MYH9P35579 1960 aaKnown RBP1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 ANKARQ7Z5J8 1434 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 EPRSP07814 1512 aaKnown RBP1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 DLC1Q96QB1 1528 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 UGGT2Q9NYU1 1516 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 MROH1Q8NDA8 1641 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 PARP14Q460N5 1801 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 TRBV10-2A0A0K0K1G8 114 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 UBE2L5PA0A1B0GUS4 154 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 LOC107986453A0A1B0GWG9 222 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 KANTRA0A1W2PQU2 76 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 ATOX1O00244 68 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 OR1I1O60431 355 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 SHBGP04278 402 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 IGKV1-16P04430 117 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 IL5P05113 134 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 IGLC2P0DOY2 106 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 IGLC3P0DOY3 106 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 PIPP12273 146 aaPredicted RBP1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 CKS2P33552 79 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 KRTDAPP60985 99 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 BLCAPP62952 87 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 UBE2L3P68036 154 aaKnown RBP1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 NUMA1Q14980 2115 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms