RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 TOMM6Q96B49 74 aa14.35□□□□□ -0.11
BBS4-204ENST00000562084 IGHV7-4-1A0A0J9YVY3 117 aa14.34□□□□□ -0.11
BBS4-204ENST00000562084 TRGV3P03979 118 aa14.34□□□□□ -0.11
BBS4-204ENST00000562084 ERCC8Q13216 396 aa14.34□□□□□ -0.11
BBS4-204ENST00000562084 C20orf78Q9BR46 151 aa14.34□□□□□ -0.11
BBS4-204ENST00000562084 ONECUT1Q9UBC0 465 aa14.34□□□□□ -0.11
BBS4-204ENST00000562084 C8orf86Q6ZUL3 223 aa14.33□□□□□ -0.11
BBS4-204ENST00000562084 NEXN-AS1Q8NBZ9 246 aa14.33□□□□□ -0.11
BBS4-204ENST00000562084 VKORC1Q9BQB6 163 aa14.33□□□□□ -0.11
BBS4-204ENST00000562084 PGPEP1Q9NXJ5 209 aa14.33□□□□□ -0.11
BBS4-204ENST00000562084 CCL21O00585 134 aa14.33□□□□□ -0.12
BBS4-204ENST00000562084 LGALS1P09382 135 aaKnown RBP14.33□□□□□ -0.12
BBS4-204ENST00000562084 TMEM78Q5T7P6 136 aa14.33□□□□□ -0.12
BBS4-204ENST00000562084 OOSP1A8MZH6 123 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 PPIFP30405 207 aaKnown RBP14.32□□□□□ -0.12
BBS4-204ENST00000562084 UBE2D1P51668 147 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 CRYBA4P53673 196 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 PRB3Q04118 309 aaPredicted RBP14.32□□□□□ -0.12
BBS4-204ENST00000562084 SPANXN1Q5VSR9 72 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 IGFL4Q6B9Z1 124 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 SCGB3A1Q96QR1 104 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 UFC1Q9Y3C8 167 aa14.32□□□□□ -0.12
BBS4-204ENST00000562084 LINC01549A6NIU2 74 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 PRAC2D3DTV9 90 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 M0R1W7 72 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 KLK9Q2XQG4 91 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 GEMIN7Q9H840 131 aaKnown RBP14.31□□□□□ -0.12
BBS4-204ENST00000562084 KLK9Q9UKQ9 250 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 MYO18BQ8IUG5 2567 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 FLNCQ14315 2725 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 ODF3BA8MYP8 253 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 BUB3O43684 328 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 EFNA4P52798 201 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 HES1Q14469 280 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
BBS4-204ENST00000562084 ABCA1O95477 2261 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 CENPVL3A0A0U1RRI6 287 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 INSL3P51460 131 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 ATP5G2Q06055 141 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 C9orf47Q6ZRZ4 202 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 SYT8Q8NBV8 401 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 PPDPFLQ8WWR9 84 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 CDIP1Q9H305 208 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 C11orf21Q9P2W6 132 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 LENEPQ9Y5L5 61 aa14.3□□□□□ -0.12
BBS4-204ENST00000562084 UBR5O95071 2799 aaPredicted RBP14.3□□□□□ -0.12
BBS4-204ENST00000562084 TRBV20-1A0A075B6N2 111 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 UBE2D3P61077 147 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 UBE2D2P62837 147 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 CLUHP3Q96NS8 147 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 M0R381 172 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 PPP1R17O96001 155 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 PLA2G2AP14555 144 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 PAPPA-AS1Q5QFB9 102 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 Q8N6K4 173 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 ZFAND3Q9H8U3 227 aa14.29□□□□□ -0.12
BBS4-204ENST00000562084 SPINK8P0C7L1 97 aa14.28□□□□□ -0.12
BBS4-204ENST00000562084 SUMO2P61956 95 aaKnown RBP14.28□□□□□ -0.12
BBS4-204ENST00000562084 ADORA2A-AS1P86434 159 aa14.28□□□□□ -0.12
BBS4-204ENST00000562084 NDPQ00604 133 aa14.28□□□□□ -0.12
BBS4-204ENST00000562084 EBI3Q14213 229 aa14.28□□□□□ -0.12
BBS4-204ENST00000562084 PRADC1Q9BSG0 188 aa14.28□□□□□ -0.12
BBS4-204ENST00000562084 TRAV26-2A0A0B4J265 109 aa14.27□□□□□ -0.12
BBS4-204ENST00000562084 IGHV3-23P01764 117 aa14.27□□□□□ -0.12
BBS4-204ENST00000562084 SMCPP49901 116 aaPredicted RBP14.27□□□□□ -0.12
BBS4-204ENST00000562084 ZNF815PA8K554 130 aa14.27□□□□□ -0.13
BBS4-204ENST00000562084 CD3EP07766 207 aa14.27□□□□□ -0.13
BBS4-204ENST00000562084 PRTN3P24158 256 aa14.27□□□□□ -0.13
BBS4-204ENST00000562084 TEN1Q86WV5 123 aa14.27□□□□□ -0.13
BBS4-204ENST00000562084 FAM110DQ8TAY7 271 aaPredicted RBP14.27□□□□□ -0.13
BBS4-204ENST00000562084 AGRNO00468 2067 aa14.26□□□□□ -0.13
BBS4-204ENST00000562084 TRAV26-1A0A087WT03 109 aa14.26□□□□□ -0.13
BBS4-204ENST00000562084 SBSPONQ8IVN8 264 aa14.26□□□□□ -0.13
BBS4-204ENST00000562084 TSPAN13O95857 204 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 MED14OSP0DP75 135 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 COX6B1P14854 86 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 HERVK_113P61574 105 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 SCGB1D4Q6XE38 83 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 Q6ZUT4 128 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 RNF182Q8N6D2 247 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 BAALCQ8WXS3 180 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 PSMB2P49721 201 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 SRSF9Q13242 221 aaKnown RBP eCLIP14.25□□□□□ -0.13
BBS4-204ENST00000562084 DPH3P1Q9H4G8 78 aa14.25□□□□□ -0.13
BBS4-204ENST00000562084 TMEM262E9PQX1 116 aa14.24□□□□□ -0.13
BBS4-204ENST00000562084 J3QKU1 62 aa14.24□□□□□ -0.13
BBS4-204ENST00000562084 M0QXV9 152 aa14.24□□□□□ -0.13
BBS4-204ENST00000562084 MINOS1Q5TGZ0 78 aa14.24□□□□□ -0.13
BBS4-204ENST00000562084 MINOS1-NBL1R4GNA1 71 aa14.24□□□□□ -0.13
BBS4-204ENST00000562084 TRAV8-2A0A0B4J237 113 aa14.23□□□□□ -0.13
BBS4-204ENST00000562084 IGHV1-69DA0A0B4J2H0 117 aa14.23□□□□□ -0.13
BBS4-204ENST00000562084 CD7P09564 240 aa14.23□□□□□ -0.13
BBS4-204ENST00000562084 C2orf66Q6UXQ4 117 aa14.23□□□□□ -0.13
BBS4-204ENST00000562084 NFE4Q86UQ8 179 aa14.23□□□□□ -0.13
BBS4-204ENST00000562084 USP9XQ93008 2570 aaPredicted RBP14.23□□□□□ -0.13
BBS4-204ENST00000562084 SPTBN1Q01082 2364 aaKnown RBP14.23□□□□□ -0.13
BBS4-204ENST00000562084 C1orf122Q6ZSJ8 110 aa14.23□□□□□ -0.13
BBS4-204ENST00000562084 IGHV7-81A0A0B4J1V7 117 aa14.22□□□□□ -0.13
BBS4-204ENST00000562084 LOC107984156A0A0G2JMH3 177 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms