RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 STX19Q8N4C7 294 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 NAT14Q8WUY8 206 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 LRTM1Q9HBL6 345 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 SS18L2Q9UHA2 77 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 F8P00451 2351 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.16□□□□□ -2.43
HMBOX1-216ENST00000561377 TANC1Q9C0D5 1861 aa-0.16□□□□□ -2.43
HMBOX1-216ENST00000561377 STAB1Q9NY15 2570 aa-0.16□□□□□ -2.43
HMBOX1-216ENST00000561377 RREB1Q92766 1687 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 TRAV13-1A0A0B4J241 112 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 MAP1LC3B2A6NCE7 125 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 E7EQ34 232 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 GABARAPH6UMI1 98 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 SERPINB1P30740 379 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 POLR2JP52435 117 aaKnown RBP-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 MRPS15P82914 257 aaKnown RBP-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 LTC4SQ16873 150 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 UNQ5815/PRO19632Q6UWF5 114 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 NDUFA11Q86Y39 141 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 FAM24BQ8N5W8 94 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 MORN4Q8NDC4 146 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 OR4S1Q8NGB4 309 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 OR51A4Q8NGJ6 313 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 PPDPFLQ8WWR9 84 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 LXNQ9BS40 222 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 CCDC32Q9BV29 185 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 BOLA2Q9H3K6 86 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 OTORQ9NRC9 128 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 BET1LQ9NYM9 111 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 MED11Q9P086 117 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 MACF1Q9UPN3 7388 aaKnown RBP-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 A2MP01023 1474 aa-0.16□□□□□ -2.44
HMBOX1-216ENST00000561377 DLEC1Q9Y238 1755 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 TRAV17A0A0B4J275 112 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 RBAKDNA6NC62 111 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 C9JAW5 83 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 PPP5D1E7EU14 171 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 OR2H2O95918 312 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 APODP05090 189 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 PYYP10082 97 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 IFITM1P13164 125 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 ADCYAP1P18509 176 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 CKS2P33552 79 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 FAM135BQ49AJ0 1406 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 LINC00305Q7Z4B0 112 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 OR5A2Q8NGI9 324 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 SMIM11BQ8TCY0 68 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 DYDC1Q8WWB3 177 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 TMEM141Q96I45 108 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 TAF9BQ9HBM6 251 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 ATPIF1Q9UII2 106 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 SCP2D1Q9UJQ7 156 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 UHRF1BP1LA0JNW5 1464 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 CCDC171Q6TFL3 1326 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 WNK2Q9Y3S1 2297 aa-0.17□□□□□ -2.44
HMBOX1-216ENST00000561377 CPDO75976 1380 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 MYO7AQ13402 2215 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 ZNF670-ZNF695F2Z2N8 137 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 H7BYZ3 331 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 IGKCP01834 107 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 CCKP06307 115 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 S100A11P31949 105 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 TAS2R41P59536 307 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 BLCAPP62952 87 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 EMX2Q04743 252 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 TMEM78Q5T7P6 136 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 C3orf33Q6P1S2 294 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 DCUN1D2Q6PH85 259 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 SMIM20Q8N5G0 67 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 TMEM242Q9NWH2 141 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 TAS2R8Q9NYW2 309 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 COMMD3Q9UBI1 195 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 MED31Q9Y3C7 131 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 UFC1Q9Y3C8 167 aa-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 TNS1Q9HBL0 1735 aaKnown RBP-0.18□□□□□ -2.44
HMBOX1-216ENST00000561377 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 MED13LQ71F56 2210 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 PDZD2O15018 2839 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 IGHV1-24A0A0C4DH33 117 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 LOC107984640A0A0U1RRK4 108 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 E5RI56 91 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 H3BMG7 143 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 CDC42EP2O14613 210 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 UQCRQO14949 82 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 HBDP02042 147 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 NMBP08949 121 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 SLC25A4P12235 298 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 COX4I1P13073 169 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 IL7P13232 177 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 HIST1H1BP16401 226 aaKnown RBP-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 CRYGSP22914 178 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 AKR1D1P51857 326 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 PLGLB1Q02325 96 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 IQCJQ1A5X6 159 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 HSD17B12Q53GQ0 312 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 TRIQKQ629K1 86 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 TOMM20LQ6UXN7 152 aa-0.19□□□□□ -2.44
HMBOX1-216ENST00000561377 STX12Q86Y82 276 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms