RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 H3BMM0 161 aa12.71□□□□□ -0.37
HDDC3-206ENST00000561036 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
HDDC3-206ENST00000561036 CDKN1BP46527 198 aa12.71□□□□□ -0.37
HDDC3-206ENST00000561036 LINC00482Q8N8I6 264 aa12.71□□□□□ -0.37
HDDC3-206ENST00000561036 NF1P21359 2839 aa12.71□□□□□ -0.37
HDDC3-206ENST00000561036 J3KRW8 73 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 SNAI2O43623 268 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 CACNG7P62955 275 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 CITED1Q99966 193 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
HDDC3-206ENST00000561036 FLNBO75369 2602 aaKnown RBP12.7□□□□□ -0.38
HDDC3-206ENST00000561036 KNCNA6PVL3 124 aa12.69□□□□□ -0.38
HDDC3-206ENST00000561036 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
HDDC3-206ENST00000561036 Q6ZQT7 251 aa12.69□□□□□ -0.38
HDDC3-206ENST00000561036 HIST3H2BBQ8N257 126 aa12.69□□□□□ -0.38
HDDC3-206ENST00000561036 IGHV4-4A0A075B6R2 117 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 LOC102724200A0A096LPH7 203 aaPredicted RBP12.68□□□□□ -0.38
HDDC3-206ENST00000561036 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
HDDC3-206ENST00000561036 SRIP30626 198 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 ASIPP42127 132 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 KIR3DS1Q14943 382 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 KIAA1644Q3SXP7 199 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 GFI1BQ5VTD9 330 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 NAGKQ9UJ70 344 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 CUBNO60494 3623 aa12.68□□□□□ -0.38
HDDC3-206ENST00000561036 OR11H12B2RN74 326 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 IGKV3-20P01619 116 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 NTF3P20783 257 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 TWIST1Q15672 202 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 FAM159AQ6UWV7 190 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 ALKBH7Q9BT30 221 aaPredicted RBP12.67□□□□□ -0.38
HDDC3-206ENST00000561036 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 F8P00451 2351 aa12.67□□□□□ -0.38
HDDC3-206ENST00000561036 SETXQ7Z333 2677 aaKnown RBP12.66□□□□□ -0.38
HDDC3-206ENST00000561036 TRAV12-3A0A0B4J271 114 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 S100A2P29034 98 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 INSL3P51460 131 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
HDDC3-206ENST00000561036 C2CD3Q4AC94 2353 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 M0R2Z0 102 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 AMBPP02760 352 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 ESDP10768 282 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
HDDC3-206ENST00000561036 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 FAM104BQ5XKR9 115 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
HDDC3-206ENST00000561036 IFITM10A6NMD0 228 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 CYSRT1A8MQ03 144 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 H3BVH4 76 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 AKR1D1P51857 326 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 SMIM15Q7Z3B0 74 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 C20orf144Q9BQM9 153 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 TP53TG3Q9ULZ0 132 aa12.64□□□□□ -0.39
HDDC3-206ENST00000561036 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
HDDC3-206ENST00000561036 IGHV1OR15-1A0A075B7D0 117 aa12.63□□□□□ -0.39
HDDC3-206ENST00000561036 RBMY1BA6NDE4 496 aaKnown RBP12.63□□□□□ -0.39
HDDC3-206ENST00000561036 RBMY1EA6NEQ0 496 aaKnown RBP12.63□□□□□ -0.39
HDDC3-206ENST00000561036 RBMY1DP0C7P1 496 aaKnown RBP12.63□□□□□ -0.39
HDDC3-206ENST00000561036 C18orf32Q8TCD1 76 aa12.63□□□□□ -0.39
HDDC3-206ENST00000561036 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 GNRH2O43555 120 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
HDDC3-206ENST00000561036 ZNF124Q15973 351 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 C9orf66Q5T8R8 295 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 SPANXN1Q5VSR9 72 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 STHQ8IWL8 128 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 TMEM256Q8N2U0 113 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 U3KQK5 164 aa12.62□□□□□ -0.39
HDDC3-206ENST00000561036 CRXO43186 299 aaPredicted RBP12.61□□□□□ -0.39
HDDC3-206ENST00000561036 NXPH4O95158 308 aa12.61□□□□□ -0.39
HDDC3-206ENST00000561036 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
HDDC3-206ENST00000561036 TMEM18Q96B42 140 aa12.61□□□□□ -0.39
HDDC3-206ENST00000561036 PACRGQ96M98 296 aaPredicted RBP12.61□□□□□ -0.39
HDDC3-206ENST00000561036 HIST1H2BLQ99880 126 aa12.61□□□□□ -0.39
HDDC3-206ENST00000561036 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
HDDC3-206ENST00000561036 MSRB1Q9NZV6 116 aa12.61□□□□□ -0.39
HDDC3-206ENST00000561036 PHLDA3Q9Y5J5 127 aa12.61□□□□□ -0.39
HDDC3-206ENST00000561036 TRGV11A0A075B6L2 103 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 SERF1AO75920 110 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 PPBPP02775 128 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 CD7P09564 240 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 SSTP61278 116 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 MRPL51Q4U2R6 128 aaKnown RBP12.6□□□□□ -0.39
HDDC3-206ENST00000561036 PDZD11Q5EBL8 140 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 AMN1Q8IY45 258 aa12.6□□□□□ -0.39
HDDC3-206ENST00000561036 MCRIP2Q9BUT9 160 aaKnown RBP12.6□□□□□ -0.39
HDDC3-206ENST00000561036 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
HDDC3-206ENST00000561036 LINC00310P59036 64 aa12.59□□□□□ -0.39
HDDC3-206ENST00000561036 NUTF2P61970 127 aaKnown RBP12.59□□□□□ -0.39
HDDC3-206ENST00000561036 ORMDL3Q8N138 153 aa12.59□□□□□ -0.39
HDDC3-206ENST00000561036 C19orf73Q9NVV2 129 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms