RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
USP3-AS1-208ENST00000560962 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
USP3-AS1-208ENST00000560962 SAP30O75446 220 aa13.24□□□□□ -0.29
USP3-AS1-208ENST00000560962 DUSP14O95147 198 aaKnown RBP13.24□□□□□ -0.29
USP3-AS1-208ENST00000560962 ZNF124Q15973 351 aa13.24□□□□□ -0.29
USP3-AS1-208ENST00000560962 APRG1Q8IVJ8 170 aa13.24□□□□□ -0.29
USP3-AS1-208ENST00000560962 KLLNB2CW77 178 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 KRTAP24-1Q3LI83 254 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 SRIP30626 198 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 CTRLP40313 264 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 LEPP41159 167 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 HIST3H2BBQ8N257 126 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 MAP6D1Q9H9H5 199 aa13.23□□□□□ -0.29
USP3-AS1-208ENST00000560962 IFITM10A6NMD0 228 aa13.22□□□□□ -0.29
USP3-AS1-208ENST00000560962 M0R2Z0 102 aa13.22□□□□□ -0.29
USP3-AS1-208ENST00000560962 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
USP3-AS1-208ENST00000560962 COA6Q5JTJ3 125 aaKnown RBP13.22□□□□□ -0.29
USP3-AS1-208ENST00000560962 OR2K2Q8NGT1 345 aa13.22□□□□□ -0.29
USP3-AS1-208ENST00000560962 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
USP3-AS1-208ENST00000560962 TRAV12-2A0A075B6T6 113 aa13.21□□□□□ -0.29
USP3-AS1-208ENST00000560962 A0A1B0GW15 77 aa13.21□□□□□ -0.29
USP3-AS1-208ENST00000560962 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
USP3-AS1-208ENST00000560962 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 S100A8P05109 93 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 NTF3P20783 257 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 TWIST1Q15672 202 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 SPINK13Q1W4C9 94 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 TMEM256Q8N2U0 113 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 TEP1Q99973 2627 aaKnown RBP13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 C7orf71A4D174 169 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 F2Z2F3 143 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 FXYD7P58549 80 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 TP53TG3Q9ULZ0 132 aa13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 TIMM8BQ9Y5J9 83 aaPredicted RBP13.2□□□□□ -0.3
USP3-AS1-208ENST00000560962 H3BMM0 161 aa13.19□□□□□ -0.3
USP3-AS1-208ENST00000560962 HLA-DRB4P13762 266 aa13.19□□□□□ -0.3
USP3-AS1-208ENST00000560962 AMTNQ6UX39 209 aa13.19□□□□□ -0.3
USP3-AS1-208ENST00000560962 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
USP3-AS1-208ENST00000560962 MSRB1Q9NZV6 116 aa13.19□□□□□ -0.3
USP3-AS1-208ENST00000560962 HLA-DRB4X5D2U9 266 aa13.19□□□□□ -0.3
USP3-AS1-208ENST00000560962 H3BVH4 76 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 GNRH2O43555 120 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 NUPR1O60356 82 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 S100A2P29034 98 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 TSPOP30536 169 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 CDKN1BP46527 198 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 A8MTW9 85 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 Q0VG73 95 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 OR10AG1Q8NH19 301 aa13.18□□□□□ -0.3
USP3-AS1-208ENST00000560962 LOC102724200A0A096LPH7 203 aaPredicted RBP13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 SPRY2O43597 315 aa13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 ZNF324O75467 553 aaPredicted RBP13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 IQCJQ1A5X6 159 aa13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 CNFNQ9BYD5 112 aa13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 TENM1Q9UKZ4 2725 aa13.17□□□□□ -0.3
USP3-AS1-208ENST00000560962 RBMY1BA6NDE4 496 aaKnown RBP13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 RBMY1EA6NEQ0 496 aaKnown RBP13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 RBMY1DP0C7P1 496 aaKnown RBP13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 FABP4P15090 132 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 S100A4P26447 101 aaKnown RBP13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 ASIPP42127 132 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 SERF1AO75920 110 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 LINC00310P59036 64 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 OR10J3Q5JRS4 329 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 FAM159AQ6UWV7 190 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
USP3-AS1-208ENST00000560962 MAST4O15021 2626 aa13.15□□□□□ -0.3
USP3-AS1-208ENST00000560962 SNAI2O43623 268 aa13.15□□□□□ -0.3
USP3-AS1-208ENST00000560962 CMC4P56277 68 aaPredicted RBP13.15□□□□□ -0.3
USP3-AS1-208ENST00000560962 AMN1Q8IY45 258 aa13.15□□□□□ -0.3
USP3-AS1-208ENST00000560962 HIST1H2BLQ99880 126 aa13.15□□□□□ -0.3
USP3-AS1-208ENST00000560962 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
USP3-AS1-208ENST00000560962 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
USP3-AS1-208ENST00000560962 INSL3P51460 131 aa13.14□□□□□ -0.31
USP3-AS1-208ENST00000560962 BEAN1Q3B7T3 259 aa13.14□□□□□ -0.31
USP3-AS1-208ENST00000560962 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
USP3-AS1-208ENST00000560962 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
USP3-AS1-208ENST00000560962 ATRQ13535 2644 aa13.14□□□□□ -0.31
USP3-AS1-208ENST00000560962 AMBPP02760 352 aa13.13□□□□□ -0.31
USP3-AS1-208ENST00000560962 OR10D4PQ8NGN7 298 aa13.13□□□□□ -0.31
USP3-AS1-208ENST00000560962 RCHY1Q96PM5 261 aa13.13□□□□□ -0.31
USP3-AS1-208ENST00000560962 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
USP3-AS1-208ENST00000560962 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
USP3-AS1-208ENST00000560962 CLUHP3Q96NS8 147 aa13.13□□□□□ -0.31
USP3-AS1-208ENST00000560962 CD7P09564 240 aa13.12□□□□□ -0.31
USP3-AS1-208ENST00000560962 RNASE3P12724 160 aaKnown RBP13.12□□□□□ -0.31
USP3-AS1-208ENST00000560962 CACNG7P62955 275 aa13.12□□□□□ -0.31
USP3-AS1-208ENST00000560962 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
USP3-AS1-208ENST00000560962 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
USP3-AS1-208ENST00000560962 TMEM191AQ9H0A3 160 aa13.12□□□□□ -0.31
USP3-AS1-208ENST00000560962 CRXO43186 299 aaPredicted RBP13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 MRPL51Q4U2R6 128 aaKnown RBP13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 M0R381 172 aa13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms