RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 CTSGP08311 255 aa12.27□□□□□ -0.45
PBX1-219ENST00000560641 IFITM1P13164 125 aa12.27□□□□□ -0.45
PBX1-219ENST00000560641 AMELXQ99217 191 aa12.27□□□□□ -0.45
PBX1-219ENST00000560641 KIR2DL4Q99706 377 aa12.27□□□□□ -0.45
PBX1-219ENST00000560641 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
PBX1-219ENST00000560641 HERVK_113P61574 105 aa12.26□□□□□ -0.45
PBX1-219ENST00000560641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.26□□□□□ -0.45
PBX1-219ENST00000560641 C11orf86A6NJI1 115 aa12.26□□□□□ -0.45
PBX1-219ENST00000560641 PRAC2D3DTV9 90 aa12.26□□□□□ -0.45
PBX1-219ENST00000560641 C2orf66Q6UXQ4 117 aa12.26□□□□□ -0.45
PBX1-219ENST00000560641 SNCGO76070 127 aa12.25□□□□□ -0.45
PBX1-219ENST00000560641 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
PBX1-219ENST00000560641 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
PBX1-219ENST00000560641 MSRB2Q9Y3D2 182 aa12.25□□□□□ -0.45
PBX1-219ENST00000560641 VKORC1Q9BQB6 163 aa12.25□□□□□ -0.45
PBX1-219ENST00000560641 VPS13AQ96RL7 3174 aa12.25□□□□□ -0.45
PBX1-219ENST00000560641 SVILO95425 2214 aa12.24□□□□□ -0.45
PBX1-219ENST00000560641 BUB3O43684 328 aa12.24□□□□□ -0.45
PBX1-219ENST00000560641 ZFAND3Q9H8U3 227 aa12.24□□□□□ -0.45
PBX1-219ENST00000560641 CCL17Q92583 94 aa12.24□□□□□ -0.45
PBX1-219ENST00000560641 TIMD4Q96H15 378 aa12.23□□□□□ -0.45
PBX1-219ENST00000560641 TIMM23O14925 209 aa12.23□□□□□ -0.45
PBX1-219ENST00000560641 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
PBX1-219ENST00000560641 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
PBX1-219ENST00000560641 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
PBX1-219ENST00000560641 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 TRAV4A0A0B4J268 109 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 IGIPA6NJ69 53 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 FAM240AA0A1B0GVK7 77 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
PBX1-219ENST00000560641 RNASE6Q93091 150 aaKnown RBP12.22□□□□□ -0.45
PBX1-219ENST00000560641 FAM27E3Q08E93 113 aa12.21□□□□□ -0.45
PBX1-219ENST00000560641 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.45
PBX1-219ENST00000560641 LY6G5BQ8NDX9 201 aa12.21□□□□□ -0.45
PBX1-219ENST00000560641 OR10J6PQ8NGY7 276 aa12.21□□□□□ -0.45
PBX1-219ENST00000560641 TRAV8-2A0A0B4J237 113 aa12.21□□□□□ -0.46
PBX1-219ENST00000560641 CCDC179H3BU77 68 aa12.21□□□□□ -0.46
PBX1-219ENST00000560641 TSHBP01222 138 aa12.21□□□□□ -0.46
PBX1-219ENST00000560641 TIMM17AQ99595 171 aa12.21□□□□□ -0.46
PBX1-219ENST00000560641 TNFRSF18Q9Y5U5 241 aa12.21□□□□□ -0.46
PBX1-219ENST00000560641 A0A0J9YX75 114 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 TTC32Q5I0X7 151 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 Q8N1Y9 231 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 CADP27708 2225 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 NXPH4O95158 308 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 CELSR3Q9NYQ7 3312 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 A0A087WW49 117 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 PMVKQ15126 192 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 Q8N6K4 173 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 KLHL30-AS1Q8NEE0 82 aa12.2□□□□□ -0.46
PBX1-219ENST00000560641 EIF4EBP3O60516 100 aaPredicted RBP12.19□□□□□ -0.46
PBX1-219ENST00000560641 CRLF1O75462 422 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 Q6ZS46 218 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 C1orf210Q8IVY1 113 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 ONECUT1Q9UBC0 465 aa12.19□□□□□ -0.46
PBX1-219ENST00000560641 LY6DQ14210 128 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 SPENQ96T58 3664 aaKnown RBP12.18□□□□□ -0.46
PBX1-219ENST00000560641 TRBV30A0A0K0K1B3 111 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 CLPSL1A2RUU4 121 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 C9JAW5 83 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 H3BVH4 76 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 TSPEAR-AS2P59090 65 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 HERV-K104P63124 156 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 TRBV10-2A0A0K0K1G8 114 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 ODF3BA8MYP8 253 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 EBI3Q14213 229 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 TMEM126AQ9H061 195 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 S4R3C0 116 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 U3KQE9 123 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 AHCTF1Q8WYP5 2266 aa12.18□□□□□ -0.46
PBX1-219ENST00000560641 ZNF876PQ49A33 203 aa12.17□□□□□ -0.46
PBX1-219ENST00000560641 IGFL3Q6UXB1 125 aa12.17□□□□□ -0.46
PBX1-219ENST00000560641 BSPH1Q075Z2 132 aa12.17□□□□□ -0.46
PBX1-219ENST00000560641 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.16□□□□□ -0.46
PBX1-219ENST00000560641 CLEC3BP05452 202 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
PBX1-219ENST00000560641 NDPQ00604 133 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 LINC01620Q4KN68 170 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 APRG1Q8IVJ8 170 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 RNF182Q8N6D2 247 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 LGALS9O00182 355 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
PBX1-219ENST00000560641 RPL39LQ96EH5 51 aaKnown RBP12.16□□□□□ -0.46
PBX1-219ENST00000560641 TRAV8-4A0A0B4J246 113 aa12.15□□□□□ -0.46
PBX1-219ENST00000560641 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
PBX1-219ENST00000560641 DMDP11532 3685 aa12.15□□□□□ -0.46
PBX1-219ENST00000560641 COX7A1P24310 79 aa12.15□□□□□ -0.46
PBX1-219ENST00000560641 DLX1P56177 255 aa12.15□□□□□ -0.46
PBX1-219ENST00000560641 PLA2G2CQ5R387 149 aa12.15□□□□□ -0.46
PBX1-219ENST00000560641 ITLN2Q8WWU7 325 aaPredicted RBP12.15□□□□□ -0.46
PBX1-219ENST00000560641 TECTAO75443 2155 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms