RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CACNA1EQ15878 2313 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 BRWD1Q9NSI6 2320 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 TMSB15BA0A087X1C1 80 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 A0A0B4J2C4 111 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 FAM240AA0A1B0GVK7 77 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 ZNF815PA8K554 130 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 M0R3E3 92 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 ZNF883P0CG24 379 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 HLA-DMBP28068 263 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 PI4KAP42356 2102 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 ERCC8Q13216 396 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 LY6DQ14210 128 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 TMEM155Q4W5P6 130 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 TTC32Q5I0X7 151 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 Q71RC1 249 aaPredicted RBP4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 NDUFA11Q86Y39 141 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 ANKRD29Q8N6D5 301 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 CNEP1R1Q8N9A8 125 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 C9orf106Q8NAJ2 232 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 OR10J6PQ8NGY7 276 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 C17orf77Q96MU5 243 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 PRADC1Q9BSG0 188 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 MDFICQ9P1T7 246 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 UTRNP46939 3433 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 BRCA2P51587 3418 aa4.56□□□□□ -1.68
SNRPA1-209ENST00000560307 LOC107984156A0A0G2JMH3 177 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 NDUFB3O43676 98 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 SLC25A20O43772 301 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 TCL1BO95988 128 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 CCL3L1P16619 93 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 ZNF80P51504 273 aaPredicted RBP4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 SPRNQ5BIV9 151 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 HES3Q5TGS1 186 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 ARL17AQ8IVW1 177 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 TIMD4Q96H15 378 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 ZNRD1Q9P1U0 126 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 LENEPQ9Y5L5 61 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 CACNA1DQ01668 2161 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 SDK2Q58EX2 2172 aa4.55□□□□□ -1.68
SNRPA1-209ENST00000560307 PCNX2A6NKB5 2137 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 IGKV2-40A0A087WW87 121 aaPredicted RBP4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 A0A0J9YY99 117 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 H3BT86 120 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 M0R1B8 84 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 ENSAO43768 121 aaKnown RBP4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 NDUFA3O95167 84 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 IGKV2D-40P01614 121 aaPredicted RBP4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 IGLV1-47P01700 117 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 ORM1P02763 201 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV1-8P0DP01 117 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 LOXP28300 417 aaPredicted RBP4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 HERV-K104P63124 156 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 FAM27E3Q08E93 113 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 ATXN8Q156A1 80 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 SCGB1D4Q6XE38 83 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 SLC25A29Q8N8R3 303 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 SCGB3A1Q96QR1 104 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 DOCK7Q96N67 2140 aa4.54□□□□□ -1.68
SNRPA1-209ENST00000560307 TNCP24821 2201 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 CACNA1GO43497 2377 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGLV11-55A0A075B6I3 123 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 TRAV8-2A0A0B4J237 113 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 TRAV8-4A0A0B4J246 113 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV1-3A0A0C4DH29 117 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV7-4-1A0A0J9YVY3 117 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 A0A0J9YX75 114 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 TRBV7-7A0A0K0K1E9 115 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 TMEM178BH3BS89 294 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV3-30P01768 117 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 ATP5G1P05496 136 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV3-30-5P0DP03 117 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 DIAPH2-AS1Q14236 149 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 HES1Q14469 280 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 KLK9Q2XQG4 91 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGFL2Q6UWQ7 119 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 GFRALQ6UXV0 394 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 ZFP2Q6ZN57 461 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 POM121L12Q8N7R1 296 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 DEFB108BQ8NET1 73 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 BAALCQ8WXS3 180 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 TMEM141Q96I45 108 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IMUPQ9GZP8 106 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 MSRB1Q9NZV6 116 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 KLK9Q9UKQ9 250 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 KNL1Q8NG31 2342 aa4.53□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV3-21A0A0B4J1V1 117 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 TRBV10-2A0A0K0K1G8 114 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 A4D1N5 150 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 H3BMM0 161 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 BUB1B-PAK6H3BSN5 160 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 CFC1BP0CG36 223 aa4.52□□□□□ -1.69
SNRPA1-209ENST00000560307 CFC1P0CG37 223 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms