RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DKK2Q9UBU2 259 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 NAGKQ9UJ70 344 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 DNAH9Q9NYC9 4486 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 SERTM2A0A1B0GWG4 89 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 GRIFINA4D1Z8 144 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 KLLNB2CW77 178 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 C9JCJ5 164 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 K7EQM0 130 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 DUSP14O95147 198 aaKnown RBP3.79□□□□□ -1.8
SPG11-220ENST00000559933 APOC3P02656 99 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 FRMD6-AS1P0C7T7 363 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 TAS2R60P59551 318 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 NDUFA5Q16718 116 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 TMEM241Q24JQ0 296 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 DEFB135Q30KP9 77 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 TMEM183AQ8IXX5 376 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 MRAPQ8TCY5 172 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 ISOC2Q96AB3 205 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 LINC00477Q96M19 166 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 NEU1Q99519 415 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 FAM110AQ9BQ89 295 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 TXNDC17Q9BRA2 123 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 TCEAL7Q9BRU2 100 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 NIPSNAP3BQ9BS92 247 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 TUBA4BQ9H853 241 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 NAT8Q9UHE5 227 aa3.79□□□□□ -1.8
SPG11-220ENST00000559933 LOC102724200A0A096LPH7 203 aaPredicted RBP3.78□□□□□ -1.8
SPG11-220ENST00000559933 MUC21A0A0G2JKD1 596 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 MUC21A0A140T8X8 626 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 C7orf71A4D174 169 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 C19orf71A6NCJ1 209 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 ZNF705GA8MUZ8 300 aaPredicted RBP3.78□□□□□ -1.8
SPG11-220ENST00000559933 ZNF324O75467 553 aaPredicted RBP3.78□□□□□ -1.8
SPG11-220ENST00000559933 GPX1P07203 203 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 HTN1P15515 57 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 CRISP2P16562 243 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 LEPP41159 167 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 CDKN1BP46527 198 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 TCL1AP56279 114 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 FOXI1Q12951 378 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 ANXA2RQ3ZCQ2 193 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 SMUG1Q53HV7 270 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 C10orf91Q5T1B1 145 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 NDFIP1Q9BT67 221 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 SEC11CQ9BY50 192 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 CARHSP1Q9Y2V2 147 aaKnown RBP3.78□□□□□ -1.8
SPG11-220ENST00000559933 TIMM8BQ9Y5J9 83 aaPredicted RBP3.78□□□□□ -1.8
SPG11-220ENST00000559933 TENM3Q9P273 2699 aa3.78□□□□□ -1.8
SPG11-220ENST00000559933 IGKV3D-20A0A0C4DH25 116 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 DEFB4AO15263 64 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 GNRH2O43555 120 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 INSP01308 110 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 PFN1P07737 140 aaKnown RBP3.77□□□□□ -1.81
SPG11-220ENST00000559933 AZU1P20160 251 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 GCSHP23434 173 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 ERVFC1-1P60608 527 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 SSTP61278 116 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 DEFA6Q01524 100 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 RNF212Q495C1 297 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 DEFB121Q5J5C9 76 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 FAM162BQ5T6X4 162 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 CBLN2Q8IUK8 224 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 SBSPONQ8IVN8 264 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 ARL6IP6Q8N6S5 226 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 CSNK1G2-AS1Q8NCQ2 148 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 SFRP2Q96HF1 295 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 ODF3Q96PU9 254 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 TPPP3Q9BW30 176 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 SMDT1Q9H4I9 107 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 FAM30AQ9NZY2 134 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 ZFP30Q9Y2G7 519 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 COX11Q9Y6N1 276 aa3.77□□□□□ -1.81
SPG11-220ENST00000559933 TRAV21A0A0B4J279 112 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 B4DEV8 164 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 KRBOX1C9JBD0 128 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 GATCO43716 136 aaKnown RBP3.76□□□□□ -1.81
SPG11-220ENST00000559933 NDUFS6O75380 124 aaKnown RBP3.76□□□□□ -1.81
SPG11-220ENST00000559933 P01737 135 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 ORM1P02763 201 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 TYMSP04818 313 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 S100A9P06702 114 aaKnown RBP3.76□□□□□ -1.81
SPG11-220ENST00000559933 TSPOP30536 169 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 CMC4P56277 68 aaPredicted RBP3.76□□□□□ -1.81
SPG11-220ENST00000559933 FAM74A3Q4VXF1 159 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 SAPCD1Q5SSQ6 148 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 IBA57Q5T440 356 aaKnown RBP3.76□□□□□ -1.81
SPG11-220ENST00000559933 Q6AWC8 147 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 TMEM88Q6PEY1 159 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 COX8CQ7Z4L0 72 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 OR2D3Q8NGH3 330 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 CSTL1Q9H114 145 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 RPP21Q9H633 154 aaKnown RBP3.76□□□□□ -1.81
SPG11-220ENST00000559933 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 MDFICQ9P1T7 246 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 URGCP-MRPS24S4R325 110 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms