RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 TRAV21A0A0B4J279 112 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 SPRY2O43597 315 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 S100PP25815 95 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 KCNIP4Q6PIL6 250 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 Q8N1Y9 231 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 PYGO2Q9BRQ0 406 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 TPPP3Q9BW30 176 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 A8MWL6 223 aa12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 G3V4G9 280 aa12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 MRPL54Q6P161 138 aaKnown RBP12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 GTSCR1Q86UQ5 136 aa12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 XCL2Q9UBD3 114 aa12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
CHRNA3-206ENST00000559658 TRBV24-1A0A075B6N3 115 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 GNRH2O43555 120 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 RAB5AP20339 215 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 TSPOP30536 169 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 SSTP61278 116 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 NAT8BQ9UHF3 227 aa12.68□□□□□ -0.38
CHRNA3-206ENST00000559658 NBEAL1Q6ZS30 2694 aa12.67□□□□□ -0.38
CHRNA3-206ENST00000559658 TYMSP04818 313 aa12.66□□□□□ -0.38
CHRNA3-206ENST00000559658 ARMS2P0C7Q2 107 aa12.66□□□□□ -0.38
CHRNA3-206ENST00000559658 IGLC6P0CF74 106 aa12.66□□□□□ -0.38
CHRNA3-206ENST00000559658 SRD5A3Q9H8P0 318 aa12.66□□□□□ -0.38
CHRNA3-206ENST00000559658 DNAH3Q8TD57 4116 aa12.66□□□□□ -0.38
CHRNA3-206ENST00000559658 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 LYZL1Q6UWQ5 148 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 H3BVH4 76 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 DNHD1Q96M86 4753 aa12.65□□□□□ -0.38
CHRNA3-206ENST00000559658 FER1L6-AS1Q8NA97 138 aa12.64□□□□□ -0.39
CHRNA3-206ENST00000559658 HTN1P15515 57 aa12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 RPS10P46783 165 aaKnown RBP12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 EGFEM1PQ0D2K5 195 aa12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 MUC4Q99102 2169 aa12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 FAM159AQ6UWV7 190 aa12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 OR10AG1Q8NH19 301 aa12.63□□□□□ -0.39
CHRNA3-206ENST00000559658 NBEAL2Q6ZNJ1 2754 aa12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 INSP01308 110 aa12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 CTRLP40313 264 aa12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 RPS20P60866 119 aaKnown RBP12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
CHRNA3-206ENST00000559658 IGHV3OR16-12A0A075B7B8 117 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 IGHV1OR15-1A0A075B7D0 117 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 CAMPP49913 170 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 SAMD5Q5TGI4 173 aa12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
CHRNA3-206ENST00000559658 TRGC2P03986 189 aa12.6□□□□□ -0.39
CHRNA3-206ENST00000559658 PHOX2AO14813 284 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 IGHV4-30-4P0DP06 118 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 ASIPP42127 132 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 TMEM136Q6ZRR5 245 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 SNURFLB1AK76 121 aa12.59□□□□□ -0.39
CHRNA3-206ENST00000559658 CBY3A6NI87 242 aa12.58□□□□□ -0.4
CHRNA3-206ENST00000559658 SNAI2O43623 268 aa12.58□□□□□ -0.4
CHRNA3-206ENST00000559658 AZU1P20160 251 aa12.58□□□□□ -0.4
CHRNA3-206ENST00000559658 RAB4BP61018 213 aa12.58□□□□□ -0.4
CHRNA3-206ENST00000559658 NUTF2P61970 127 aaKnown RBP12.58□□□□□ -0.4
CHRNA3-206ENST00000559658 LINC01587Q99440 93 aa12.58□□□□□ -0.4
CHRNA3-206ENST00000559658 NTF3P20783 257 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 HBBP68871 147 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 SLAQ13239 276 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 KCNS1Q96KK3 526 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
CHRNA3-206ENST00000559658 AMBPP02760 352 aa12.56□□□□□ -0.4
CHRNA3-206ENST00000559658 RIPPLY3P57055 190 aa12.56□□□□□ -0.4
CHRNA3-206ENST00000559658 ATP5L2Q7Z4Y8 100 aa12.56□□□□□ -0.4
CHRNA3-206ENST00000559658 TMEM208Q9BTX3 173 aa12.56□□□□□ -0.4
CHRNA3-206ENST00000559658 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
CHRNA3-206ENST00000559658 M0R381 172 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 TWIST1Q15672 202 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 DNLZQ5SXM8 178 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 FRZBQ92765 325 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms