RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SCO2A0A1W2PP80 73 aa8.74□□□□□ -1.01
SMAD3-205ENST00000558428 ATP5G1P05496 136 aa8.74□□□□□ -1.01
SMAD3-205ENST00000558428 PFN1P07737 140 aaKnown RBP8.74□□□□□ -1.01
SMAD3-205ENST00000558428 Q6ZTI0 123 aa8.74□□□□□ -1.01
SMAD3-205ENST00000558428 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
SMAD3-205ENST00000558428 NDUFAF3Q9BU61 184 aa8.74□□□□□ -1.01
SMAD3-205ENST00000558428 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
SMAD3-205ENST00000558428 MUC4Q99102 2169 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 TRGV1A0A0A0MS02 117 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 F5H768 121 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 LY6G6CO95867 125 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 TDRG1Q3Y452 100 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 SDF2L1Q9HCN8 221 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 MDFICQ9P1T7 246 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
SMAD3-205ENST00000558428 TRGV2A0A075B6R0 118 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 TRBV6-1A0A0K0K1D8 114 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 GNRH2O43555 120 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 SPINK4O60575 86 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 IFNA1P01562 189 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 TYMSP04818 313 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 FAM210BQ96KR6 192 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 MRPL16Q9NX20 251 aaKnown RBP8.72□□□□□ -1.01
SMAD3-205ENST00000558428 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
SMAD3-205ENST00000558428 LTAP01374 205 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 S100A9P06702 114 aaKnown RBP8.71□□□□□ -1.02
SMAD3-205ENST00000558428 BLOC1S1P78537 153 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 LGALS9CQ6DKI2 356 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 TMEM88Q6PEY1 159 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 TXNDC17Q9BRA2 123 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 SPXQ9BT56 116 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 NACAE9PAV3 2078 aa8.71□□□□□ -1.02
SMAD3-205ENST00000558428 IGHV3-16A0A0C4DH30 117 aa8.7□□□□□ -1.02
SMAD3-205ENST00000558428 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
SMAD3-205ENST00000558428 BCL2P10415 239 aa8.7□□□□□ -1.02
SMAD3-205ENST00000558428 LGALS9BQ3B8N2 356 aa8.7□□□□□ -1.02
SMAD3-205ENST00000558428 COX8CQ7Z4L0 72 aa8.7□□□□□ -1.02
SMAD3-205ENST00000558428 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
SMAD3-205ENST00000558428 MEF2BQ02080 365 aaPredicted RBP8.69□□□□□ -1.02
SMAD3-205ENST00000558428 OR5I1Q13606 314 aa8.69□□□□□ -1.02
SMAD3-205ENST00000558428 NHLRC2Q8NBF2 726 aa8.69□□□□□ -1.02
SMAD3-205ENST00000558428 C11orf52Q96A22 123 aa8.69□□□□□ -1.02
SMAD3-205ENST00000558428 C18orf15Q96N68 181 aa8.69□□□□□ -1.02
SMAD3-205ENST00000558428 M0R2P5 195 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 PDE6DO43924 150 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 SH2D1AO60880 128 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 IGHV3-53P01767 116 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 ORM1P02763 201 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 HOXA5P20719 270 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
SMAD3-205ENST00000558428 CRIP1P50238 77 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 FAM162BQ5T6X4 162 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 C15orf53Q8NAA6 179 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 VAX2Q9UIW0 290 aa8.68□□□□□ -1.02
SMAD3-205ENST00000558428 IGKV3D-20A0A0C4DH25 116 aa8.67□□□□□ -1.02
SMAD3-205ENST00000558428 B4DEV8 164 aa8.67□□□□□ -1.02
SMAD3-205ENST00000558428 TAGLN2P37802 199 aaKnown RBP8.67□□□□□ -1.02
SMAD3-205ENST00000558428 ZNF674Q2M3X9 581 aa8.67□□□□□ -1.02
SMAD3-205ENST00000558428 RASL10AQ92737 203 aa8.67□□□□□ -1.02
SMAD3-205ENST00000558428 DERL1Q9BUN8 251 aa8.67□□□□□ -1.02
SMAD3-205ENST00000558428 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 A0A0J9YY99 117 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 M0R036 132 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 NUDT3O95989 172 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 P0DMU3 169 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
SMAD3-205ENST00000558428 LYPD6BQ8NI32 183 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 MED9Q9NWA0 146 aa8.66□□□□□ -1.02
SMAD3-205ENST00000558428 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
SMAD3-205ENST00000558428 C9JCJ5 164 aa8.65□□□□□ -1.02
SMAD3-205ENST00000558428 SFTA3P0C7M3 94 aa8.65□□□□□ -1.02
SMAD3-205ENST00000558428 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
SMAD3-205ENST00000558428 ASIPP42127 132 aa8.65□□□□□ -1.02
SMAD3-205ENST00000558428 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
SMAD3-205ENST00000558428 C9orf85Q96MD7 179 aa8.65□□□□□ -1.02
SMAD3-205ENST00000558428 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 RAB19A4D1S5 217 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 GRIFINA4D1Z8 144 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 PRR27Q6MZM9 219 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 ZNF479Q96JC4 524 aa8.64□□□□□ -1.03
SMAD3-205ENST00000558428 TRGV4A0A0C4DH28 118 aa8.63□□□□□ -1.03
SMAD3-205ENST00000558428 H3BVH4 76 aa8.63□□□□□ -1.03
SMAD3-205ENST00000558428 MGST1P10620 155 aaKnown RBP8.63□□□□□ -1.03
SMAD3-205ENST00000558428 GNG4P50150 75 aa8.63□□□□□ -1.03
SMAD3-205ENST00000558428 FHL2Q14192 279 aa8.63□□□□□ -1.03
SMAD3-205ENST00000558428 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
SMAD3-205ENST00000558428 ZNF506Q5JVG8 444 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms