RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TRBV7-1A0A0A6YYK4 115 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 SUMO2P61956 95 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 AMTNQ6UX39 209 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 Q6ZQT7 251 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 C20orf78Q9BR46 151 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 KLK15Q9H2R5 256 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 SH2D6Q7Z4S9 175 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 NEXN-AS1Q8NBZ9 246 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 U3KQE9 123 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 G3V318 75 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 ZFP36P26651 326 aaKnown RBP9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 C11orf71Q6IPW1 123 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 SPAG8Q99932 426 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 SPATA25Q9BR10 227 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 SIRPDQ9H106 197 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
VIPAS39-211ENST00000557658 ZNF292O60281 2723 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 HOXA3O43365 443 aaPredicted RBP9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 SCGB2A2Q13296 93 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 PRR9Q5T870 116 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 C9orf139Q6ZV77 190 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 CYSLTR1Q9Y271 337 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 M0R381 172 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 LGALS1P09382 135 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 RIF1Q5UIP0 2472 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 RASL10AQ92737 203 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 PRO0461Q9UI25 63 aa9.01□□□□□ -0.97
VIPAS39-211ENST00000557658 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
VIPAS39-211ENST00000557658 UBE2E1P51965 193 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 LRBAP50851 2863 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 TRAV21A0A0B4J279 112 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 A6NJY4 79 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 CCL21O00585 134 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 ATP5G2Q06055 141 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 LINC00477Q96M19 166 aa9□□□□□ -0.97
VIPAS39-211ENST00000557658 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 J3KRW8 73 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 ASIPP42127 132 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 BAALCQ8WXS3 180 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 PRADC1Q9BSG0 188 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 DCHS2Q6V1P9 2916 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 LINC01548A6NM66 108 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 MORN3Q6PF18 240 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 MTURNQ8N3F0 131 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 GLMPQ8WWB7 406 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 ITLN2Q8WWU7 325 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 PGPEP1Q9NXJ5 209 aa8.99□□□□□ -0.97
VIPAS39-211ENST00000557658 CACNA1BQ00975 2339 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 PRSS29PA6NIE9 313 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 ZNF815PA8K554 130 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 OR10J6PQ8NGY7 276 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 AJUBAQ96IF1 538 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 C20orf173Q96LM9 149 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 SPOCK3Q9BQ16 436 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 TLN1Q9Y490 2541 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 NDUFS8O00217 210 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 OVOL1O14753 267 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 PPP1R17O96001 155 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 IGF1P05019 195 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 MGPP08493 103 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 SAA4P35542 130 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 SCGB1D4Q6XE38 83 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-211ENST00000557658 MED14OSP0DP75 135 aa8.97□□□□□ -0.97
VIPAS39-211ENST00000557658 CSMD1Q96PZ7 3565 aa8.97□□□□□ -0.97
VIPAS39-211ENST00000557658 A0A1B0GV72 72 aa8.97□□□□□ -0.97
VIPAS39-211ENST00000557658 APOMO95445 188 aa8.97□□□□□ -0.97
VIPAS39-211ENST00000557658 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-211ENST00000557658 MED13LQ71F56 2210 aa8.96□□□□□ -0.97
VIPAS39-211ENST00000557658 K7ENP7 123 aa8.96□□□□□ -0.97
VIPAS39-211ENST00000557658 SPRY2O43597 315 aa8.96□□□□□ -0.97
VIPAS39-211ENST00000557658 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.97
VIPAS39-211ENST00000557658 LCNL1Q6ZST4 164 aa8.96□□□□□ -0.97
VIPAS39-211ENST00000557658 FAM223BA6NKX1 122 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 RNF223E7ERA6 249 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 CDSNQ15517 529 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 ANXA2RQ3ZCQ2 193 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 FAM223AQ8IWN6 122 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 C5orf56Q8N8D9 126 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 ATP6V0E2Q8NHE4 81 aa8.96□□□□□ -0.98
VIPAS39-211ENST00000557658 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 ARL3P36405 182 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 INSL3P51460 131 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 COX6B1P14854 86 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 UBE2D1P51668 147 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 CFAP126Q5VTH2 177 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 PLEKHB2Q96CS7 222 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 C1QTNF4Q9BXJ3 329 aa8.95□□□□□ -0.98
VIPAS39-211ENST00000557658 HERVK_113P61574 105 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms