RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MRPS36P82909 103 aaKnown RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 Q1T7F1 81 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TTC32Q5I0X7 151 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZFP2Q6ZN57 461 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 OR5AS1Q8N127 324 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SIGLECL1Q8N7X8 197 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF555Q8NEP9 628 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 MRPL30Q8TCC3 161 aaKnown RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SCGB1C1Q8TD33 95 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 DIRC1Q969H9 104 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 EEF1AKMT3Q96AZ1 226 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 HDHD3Q9BSH5 251 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 CMC2Q9NRP2 79 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 HES2Q9Y543 173 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 DOCK4Q8N1I0 1966 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 EXPH5Q8NEV8 1989 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 A0A1W2PQD3 144 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 KANTRA0A1W2PQU2 76 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 PGPA6NDG6 321 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 IGLL5B9A064 214 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 SDCBPO00560 298 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-212ENST00000557538 CCL16O15467 120 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 LYZL6O75951 148 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 CD3DP04234 171 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 RBMY1CP0DJD4 496 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 COX6A1P12074 109 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 FABP2P12104 132 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 SDC2P34741 201 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 RPS21P63220 83 aaKnown RBP1.04□□□□□ -2.24
HIF1A-212ENST00000557538 C1DQ13901 141 aaKnown RBP1.04□□□□□ -2.24
HIF1A-212ENST00000557538 ADIRFQ15847 76 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 LINC01545Q5VT33 79 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 SLC25A34Q6PIV7 304 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 PRNTQ86SH4 94 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 TMEM61Q8N0U2 210 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 WFDC11Q8NEX6 87 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 CLDND2Q8NHS1 167 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 KCNS1Q96KK3 526 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 C2orf50Q96LR7 162 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 CCL13Q99616 98 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 NMES1Q9C002 83 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 C11orf1Q9H5F2 150 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 SCN1AP35498 2009 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 GON4LQ3T8J9 2241 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 TRBV6-6A0A0A6YYG2 114 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV6-1A0A0B4J1U7 121 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV3-74A0A0B4J1X5 117 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 TRBV27A0A0K0K1C4 114 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 C10orf142B7Z368 130 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 J3QRE1 110 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 APOC4-APOC2K7ER74 178 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 M0R129 80 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 M0R381 172 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 IGKCP01834 107 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 TRACP01848 142 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 FAM229BQ4G0N7 80 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 NCBP2-AS2Q69YL0 99 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 NTM-AS1Q6ZSK4 140 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 LCA10Q71F78 164 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 BPIFA4PQ86YQ2 179 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 GPHB5Q86YW7 130 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 DRAM1Q8N682 238 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 C10orf105Q8TEF2 133 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 MCEEQ96PE7 176 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 METTL26Q96S19 204 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 UBR3Q6ZT12 1888 aa1.04□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV9-1A0A075B6T8 112 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 A8MWV9 139 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 NDUFS5O43920 106 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CST7O76096 145 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV2-8P01709 118 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 HMGA1P17096 107 aaKnown RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 IL3RAP26951 378 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 PSMB3P49720 205 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF138P52744 262 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 SNRPD3P62318 126 aaKnown RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 KISS1Q15726 138 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00305Q7Z4B0 112 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 OR5C1Q8NGR4 320 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 BRK1Q8WUW1 75 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 C11orf68Q9H3H3 251 aaKnown RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00474Q9P2X8 69 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 NOP16Q9Y3C1 178 aaKnown RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 KIAA1549LQ6ZVL6 1849 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 AHNAKQ09666 5890 aaKnown RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 FXYD6-FXYD2A0A087WZ82 144 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1-8A0A0C4DH67 115 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 A0A1W2PNU3 283 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 TCRBV4S1A1TA0A5B7 111 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 hADV29S1A0JD25 119 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 LRCOL1A6NCL2 159 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 C19orf84I3L1E1 186 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 SYNGR2O43760 224 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 APOC2P02655 101 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CCKP06307 115 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CXCL8P10145 99 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CACNG7P62955 275 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CCL20P78556 96 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CENPWQ5EE01 88 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 MDP1Q86V88 176 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms