RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 RNF212Q495C1 297 aa8.06□□□□□ -1.12
TMEM260-208ENST00000555905 FAM159AQ6UWV7 190 aa8.06□□□□□ -1.12
TMEM260-208ENST00000555905 OR2D3Q8NGH3 330 aa8.06□□□□□ -1.12
TMEM260-208ENST00000555905 KCNS1Q96KK3 526 aa8.06□□□□□ -1.12
TMEM260-208ENST00000555905 RPS10P5Q9NQ39 176 aa8.06□□□□□ -1.12
TMEM260-208ENST00000555905 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 A0A087WWC5 75 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 H7BYZ3 331 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 FRMD6-AS1P0C7T7 363 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 RPS20P60866 119 aaKnown RBP8.05□□□□□ -1.12
TMEM260-208ENST00000555905 MUC21Q5SSG8 566 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 Q6ZQT7 251 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 LINC01587Q99440 93 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 PYGO2Q9BRQ0 406 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 DNAH3Q8TD57 4116 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 NBEAL1Q6ZS30 2694 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 DNHD1Q96M86 4753 aa8.05□□□□□ -1.12
TMEM260-208ENST00000555905 IGHV3OR16-12A0A075B7B8 117 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 IGHV1OR15-1A0A075B7D0 117 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 TMSB15BA0A087X1C1 80 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 A8MWL6 223 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 K7EIL1 84 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 RBMY1A1P0DJD3 496 aaKnown RBP8.04□□□□□ -1.12
TMEM260-208ENST00000555905 RBMY1CP0DJD4 496 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 RBMY1FQ15415 496 aaKnown RBP8.04□□□□□ -1.12
TMEM260-208ENST00000555905 ANXA2RQ3ZCQ2 193 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 CT83Q5H943 113 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 DEFB121Q5J5C9 76 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 CSNK1G2-AS1Q8NCQ2 148 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 C11orf21Q9P2W6 132 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 V9GYV3 84 aa8.04□□□□□ -1.12
TMEM260-208ENST00000555905 IGKV3D-20A0A0C4DH25 116 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 CBY3A6NI87 242 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 HTN1P15515 57 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 RPL19P84098 196 aaKnown RBP8.03□□□□□ -1.12
TMEM260-208ENST00000555905 TDRG1Q3Y452 100 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 C1orf158Q8N1D5 194 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 RCHY1Q96PM5 261 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 TMEM242Q9NWH2 141 aa8.03□□□□□ -1.12
TMEM260-208ENST00000555905 TRGV11A0A075B6L2 103 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 ASIPP42127 132 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 DEFB135Q30KP9 77 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 Q6ZWC4 215 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 GFRA4Q9GZZ7 299 aa8.02□□□□□ -1.13
TMEM260-208ENST00000555905 GRIFINA4D1Z8 144 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 GNRH2O43555 120 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 TYMSP04818 313 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 CXCL1P09341 107 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 GZMBP10144 247 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 S100PP25815 95 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 S100A4P26447 101 aaKnown RBP8.01□□□□□ -1.13
TMEM260-208ENST00000555905 ZNF705AQ6ZN79 300 aaPredicted RBP8.01□□□□□ -1.13
TMEM260-208ENST00000555905 MRAPQ8TCY5 172 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 IL36BQ9NZH7 164 aa8.01□□□□□ -1.13
TMEM260-208ENST00000555905 A0A1W2PPQ1 181 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 SMIM27A0A1W2PRY6 76 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 FAM231BA6NCW3 169 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 CXorf65A6NEN9 183 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 SMIM9A6NGZ8 99 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 SPRY2O43597 315 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 TCL1AP56279 114 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 RRN3P1Q2M238 152 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 DNLZQ5SXM8 178 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 KCNIP4Q6PIL6 250 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 FER1L6-AS1Q8NA97 138 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 RNF183Q96D59 192 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 TPPP3Q9BW30 176 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 NAT8BQ9UHF3 227 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 TP53TG3Q9ULZ0 132 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 TP53TG1Q9Y2A0 90 aa8□□□□□ -1.13
TMEM260-208ENST00000555905 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 HIGD1CA8MV81 97 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 F2Z2F3 143 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 H3BVH4 76 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 MED14OSP0DP75 135 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 ZNF415Q09FC8 603 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 ZNF493Q6ZR52 646 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 OR11H2Q8NH07 326 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 TMEM263Q8WUH6 116 aaKnown RBP7.99□□□□□ -1.13
TMEM260-208ENST00000555905 GTSF1Q8WW33 167 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 C16orf74Q96GX8 76 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 NEU1Q99519 415 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 SMCO4Q9NRQ5 59 aa7.99□□□□□ -1.13
TMEM260-208ENST00000555905 TIMM8BQ9Y5J9 83 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-208ENST00000555905 PRM2P04554 102 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 ARMS2P0C7Q2 107 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 IGLC6P0CF74 106 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 AZU1P20160 251 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 FAM3BP58499 235 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-208ENST00000555905 ZNF575Q86XF7 245 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 PGLYRP4Q96LB8 373 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 MDFICQ9P1T7 246 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 URGCP-MRPS24S4R325 110 aa7.98□□□□□ -1.13
TMEM260-208ENST00000555905 X6R8D5 127 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms