RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 DPF1Q92782 380 aa13.78□□□□□ -0.2
GABRB3-209ENST00000555632 D6R8Y8 96 aa13.77□□□□□ -0.21
GABRB3-209ENST00000555632 CSN3P07498 182 aa13.77□□□□□ -0.21
GABRB3-209ENST00000555632 RNASE1P07998 156 aaKnown RBP13.77□□□□□ -0.21
GABRB3-209ENST00000555632 CD28P10747 220 aa13.77□□□□□ -0.21
GABRB3-209ENST00000555632 HSBP1O75506 76 aa13.76□□□□□ -0.21
GABRB3-209ENST00000555632 IGKV3-20P01619 116 aa13.76□□□□□ -0.21
GABRB3-209ENST00000555632 OR9G4Q8NGQ1 327 aa13.76□□□□□ -0.21
GABRB3-209ENST00000555632 LINC01006Q8NI28 216 aa13.76□□□□□ -0.21
GABRB3-209ENST00000555632 SMKR1H3BMG3 65 aa13.76□□□□□ -0.21
GABRB3-209ENST00000555632 LY6G6DO95868 133 aa13.76□□□□□ -0.21
GABRB3-209ENST00000555632 MRPL51Q4U2R6 128 aaKnown RBP13.76□□□□□ -0.21
GABRB3-209ENST00000555632 LINC00587B1AMM8 73 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 GAS8-AS1O95177 125 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 APRG1Q8IVJ8 170 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 TRAV21A0A0B4J279 112 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 H3BVH4 76 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 KRTDAPP60985 99 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
GABRB3-209ENST00000555632 ANXA2RQ3ZCQ2 193 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 DNLZQ5SXM8 178 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 PRO1933Q9H354 126 aa13.75□□□□□ -0.21
GABRB3-209ENST00000555632 TIMM8BQ9Y5J9 83 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-209ENST00000555632 SAMD13Q5VXD3 122 aa13.74□□□□□ -0.21
GABRB3-209ENST00000555632 RNF185Q96GF1 192 aa13.74□□□□□ -0.21
GABRB3-209ENST00000555632 HIVEP1P15822 2718 aa13.74□□□□□ -0.21
GABRB3-209ENST00000555632 A0A0J9YX75 114 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 KLLNB2CW77 178 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 NCR2O95944 276 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 LINC00614P0C842 121 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-209ENST00000555632 TMEM191AQ9H0A3 160 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 M0R2Z0 102 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 GNRH2O43555 120 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 EVI2AP22794 236 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 HILS1P60008 231 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 S100A12P80511 92 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 TDRG1Q3Y452 100 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 ZNF664Q8N3J9 261 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 U3KQK5 164 aa13.73□□□□□ -0.21
GABRB3-209ENST00000555632 TMEM61Q8N0U2 210 aa13.72□□□□□ -0.21
GABRB3-209ENST00000555632 Q8N976 141 aa13.72□□□□□ -0.21
GABRB3-209ENST00000555632 NSD1Q96L73 2696 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-209ENST00000555632 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
GABRB3-209ENST00000555632 IGHV1-24A0A0C4DH33 117 aa13.72□□□□□ -0.21
GABRB3-209ENST00000555632 C3orf79P0CE67 100 aa13.72□□□□□ -0.21
GABRB3-209ENST00000555632 RAB4AP20338 218 aa13.72□□□□□ -0.21
GABRB3-209ENST00000555632 TRBV7-9A0A0J9YWB2 115 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 LOC389332A0A1B0GUA5 103 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 SNAI2O43623 268 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 OR5AL1P0C617 328 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 ZNF124Q15973 351 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 ORMDL3Q8N138 153 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 ZNF418Q8TF45 676 aaPredicted RBP13.71□□□□□ -0.21
GABRB3-209ENST00000555632 PRELID3AQ96N28 172 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 PEMTQ9UBM1 199 aa13.71□□□□□ -0.21
GABRB3-209ENST00000555632 TRAV12-3A0A0B4J271 114 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 C16orf95Q9H693 158 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 TMEM160Q9NX00 188 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 CKS2P33552 79 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 IFI27P40305 119 aaPredicted RBP13.7□□□□□ -0.22
GABRB3-209ENST00000555632 DMRTA1Q5VZB9 504 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 LINC00173Q6ZV60 143 aa13.7□□□□□ -0.22
GABRB3-209ENST00000555632 CHCHD1Q96BP2 118 aaKnown RBP13.7□□□□□ -0.22
GABRB3-209ENST00000555632 NPYP01303 97 aa13.69□□□□□ -0.22
GABRB3-209ENST00000555632 SPANXN1Q5VSR9 72 aa13.69□□□□□ -0.22
GABRB3-209ENST00000555632 GATA1P15976 413 aaPredicted RBP13.69□□□□□ -0.22
GABRB3-209ENST00000555632 FHL3Q13643 280 aa13.69□□□□□ -0.22
GABRB3-209ENST00000555632 CCL24O00175 119 aa13.68□□□□□ -0.22
GABRB3-209ENST00000555632 RNASE3P12724 160 aaKnown RBP13.68□□□□□ -0.22
GABRB3-209ENST00000555632 SPINK13Q1W4C9 94 aa13.68□□□□□ -0.22
GABRB3-209ENST00000555632 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
GABRB3-209ENST00000555632 MUC4Q99102 2169 aa13.68□□□□□ -0.22
GABRB3-209ENST00000555632 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 M0R381 172 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
GABRB3-209ENST00000555632 DEFB131AP59861 70 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 SCGB2A2Q13296 93 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 CD300EQ496F6 205 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-209ENST00000555632 IGHV4-4A0A075B6R2 117 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 ASIPP42127 132 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 PRSS3P2Q8NHM4 247 aa13.67□□□□□ -0.22
GABRB3-209ENST00000555632 FN1P02751 2386 aaKnown RBP13.67□□□□□ -0.22
GABRB3-209ENST00000555632 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 INAFM1C9JVW0 142 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 SPATA12Q7Z6I5 190 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 DYNLRB2Q8TF09 96 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 PKIAP61925 76 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 AMTNQ6UX39 209 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 FOXI2Q6ZQN5 318 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 AP5S1Q9NUS5 200 aa13.66□□□□□ -0.22
GABRB3-209ENST00000555632 C7orf71A4D174 169 aa13.65□□□□□ -0.22
GABRB3-209ENST00000555632 FXYD7P58549 80 aa13.65□□□□□ -0.22
GABRB3-209ENST00000555632 SCRT2Q9NQ03 307 aa13.65□□□□□ -0.22
GABRB3-209ENST00000555632 TSSC4Q9Y5U2 329 aaPredicted RBP13.65□□□□□ -0.22
GABRB3-209ENST00000555632 FLNBO75369 2602 aaKnown RBP13.64□□□□□ -0.23
GABRB3-209ENST00000555632 TEX43Q6ZNM6 134 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms