RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 F6UB75 175 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 CLEC19AQ6UXS0 136 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 Q6ZS46 218 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 CITED1Q99966 193 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 U3KQK5 164 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 TRAV8-2A0A0B4J237 113 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 IGKV3-20P01619 116 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 CRIP2P52943 208 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-217ENST00000555022 PRR30Q53SZ7 412 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-217ENST00000555022 Q6ZUT4 128 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-217ENST00000555022 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
SYNE2-217ENST00000555022 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 CUL9Q8IWT3 2517 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 A0A1B0GW15 77 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 F5H697 171 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 TSPAN13O95857 204 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 MFAP4P55083 255 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 FAM74A4Q5TZK3 123 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 JPT2Q9H910 190 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 NCOR2Q9Y618 2525 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 C9JAW5 83 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 G3V318 75 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 DLX6P56179 175 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 RPL39P62891 51 aaKnown RBP6.85□□□□□ -1.31
SYNE2-217ENST00000555022 CARD19Q96LW7 228 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 SPATA25Q9BR10 227 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 TM2D2Q9BX73 214 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 MRPS12O15235 138 aaKnown RBP6.85□□□□□ -1.31
SYNE2-217ENST00000555022 TCL1BO95988 128 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 HOXB4P17483 251 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-217ENST00000555022 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 DLX4Q92988 240 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-217ENST00000555022 RNASE6Q93091 150 aaKnown RBP6.85□□□□□ -1.31
SYNE2-217ENST00000555022 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
SYNE2-217ENST00000555022 ZFHX3Q15911 3703 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 A0A087WWL8 130 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 ATP5LO75964 103 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 DUSP14O95147 198 aaKnown RBP6.84□□□□□ -1.31
SYNE2-217ENST00000555022 IGHG4P01861 327 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 PRR9Q5T870 116 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 Q8N8P6 123 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 DPF1Q92782 380 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 A0A087WX48 190 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 NBR2O15453 112 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 FANCD2OSQ96PS1 177 aa6.84□□□□□ -1.31
SYNE2-217ENST00000555022 TRBV7-3A0A075B6L6 115 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 TRAV2A0A0B4J234 112 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 A0A0G2JNJ9 132 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 E7EQL1 145 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 GRNP28799 593 aaKnown RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 PVRIGQ6DKI7 326 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 ZNF575Q86XF7 245 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 Q9UFV3 132 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 ZNF256Q9Y2P7 627 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 CHD8Q9HCK8 2581 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 THBDP07204 575 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 C15orf32Q32M92 178 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 SMIM20Q8N5G0 67 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 SONP18583 2426 aaKnown RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 CENPEQ02224 2701 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 MBD3L4A6NDZ8 208 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 MBD3L3A6NE82 208 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 MBD3L5A6NJ08 208 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 CRYGBP07316 175 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 HTN1P15515 57 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 C2orf66Q6UXQ4 117 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 MBD3L2Q8NHZ7 208 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-217ENST00000555022 AJUBAQ96IF1 538 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 LINC00574Q9H8X3 128 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 HIGD1BQ9P298 99 aa6.83□□□□□ -1.32
SYNE2-217ENST00000555022 GNRH2O43555 120 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 CRLF1O75462 422 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 ZNF48Q96MX3 618 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-217ENST00000555022 SMPXQ9UHP9 88 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 ZNF580Q9UK33 172 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 F8VRH5 84 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-217ENST00000555022 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 H7C1H1 209 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
SYNE2-217ENST00000555022 TMEM219Q86XT9 240 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 A0A0U1RRA0 63 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 INS-IGF2F8WCM5 200 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 IGLV1-47P01700 117 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 CTSGP08311 255 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 TTC32Q5I0X7 151 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 CFAP126Q5VTH2 177 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 NRACQ8N912 160 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 RASL10AQ92737 203 aa6.82□□□□□ -1.32
SYNE2-217ENST00000555022 WNK1Q9H4A3 2382 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 PRSS2P07478 247 aa6.81□□□□□ -1.32
SYNE2-217ENST00000555022 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms