RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 C5orf17Q8NAS9 161 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 MAPKBP1O60336 1514 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 CUL7Q14999 1698 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 CCDC88CQ9P219 2028 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 PIRTP0C851 137 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 PIPP12273 146 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-211ENST00000554437 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 TTC9CQ8N5M4 171 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 WDR97A6NE52 1622 aa2.26□□□□□ -2.05
SCFD1-211ENST00000554437 USP54Q70EL1 1684 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 PLXNA3P51805 1871 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 TRAV2A0A0B4J234 112 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 A0A1W2PRS3 328 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 OOSP1A8MZH6 123 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 NPC2P61916 151 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 SPANXN1Q5VSR9 72 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 KRTAP26-1Q6PEX3 210 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 FP248Q71RG6 208 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-211ENST00000554437 OR10AG1Q8NH19 301 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 SNHG12Q9BXW3 62 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 STRCQ7RTU9 1775 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 PTPRBP23467 1997 aa2.25□□□□□ -2.05
SCFD1-211ENST00000554437 MGAMO43451 1857 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 TANC2Q9HCD6 1990 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 H3BRN7 92 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 GYPBP06028 91 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 CNBPP62633 177 aaKnown RBP2.24□□□□□ -2.05
SCFD1-211ENST00000554437 C12orf73Q69YU5 71 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 SPACA4Q8TDM5 124 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 C10orf105Q8TEF2 133 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 AQP10Q96PS8 301 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 QRICH2Q9H0J4 1663 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 CUL9Q8IWT3 2517 aa2.24□□□□□ -2.05
SCFD1-211ENST00000554437 TTC37Q6PGP7 1564 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 NRKQ7Z2Y5 1582 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 CACNA1DQ01668 2161 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 ATG2AQ2TAZ0 1938 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 TRAV17A0A0B4J275 112 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 TRGV4A0A0C4DH28 118 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 FAM24AA6NFZ4 105 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 F8W1H4 67 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 MPC2O95563 127 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 HCP5Q6MZN7 132 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 ZCCHC13Q8WW36 166 aaKnown RBP2.23□□□□□ -2.05
SCFD1-211ENST00000554437 KIF13AQ9H1H9 1805 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 RB1CC1Q8TDY2 1594 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 MYH6P13533 1939 aa2.23□□□□□ -2.05
SCFD1-211ENST00000554437 COL24A1Q17RW2 1714 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 PXDNLA1KZ92 1463 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 ZFC3H1O60293 1989 aaKnown RBP2.22□□□□□ -2.05
SCFD1-211ENST00000554437 PIGBOS1A0A0B4J2F0 54 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 TCRBV3S1A0A5B6 114 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 COX7CP15954 63 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 POLR2JP52435 117 aaKnown RBP2.22□□□□□ -2.05
SCFD1-211ENST00000554437 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-211ENST00000554437 TSKUQ8WUA8 353 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 Q9H521 79 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 NDUFA12Q9UI09 145 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 ARHGAP32A7KAX9 2087 aa2.22□□□□□ -2.05
SCFD1-211ENST00000554437 CECR2Q9BXF3 1484 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 TRBV6-8A0A0A6YYG3 113 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 RHOHQ15669 191 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 PPDPFLQ8WWR9 84 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 TMEM141Q96I45 108 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 LINC00052Q96N35 136 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 DSCR8Q96T75 97 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 TTTY12Q9BZ98 90 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 ZSWIM8A7E2V4 1837 aa2.21□□□□□ -2.06
SCFD1-211ENST00000554437 RAPGEF2Q9Y4G8 1499 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 A6NIN4 97 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 CCL16O15467 120 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 IGHV3-33P01772 117 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 PRB4P10163 310 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-211ENST00000554437 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 FAM74A1Q5RGS3 127 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 RPL7L1Q6DKI1 246 aaKnown RBP2.2□□□□□ -2.06
SCFD1-211ENST00000554437 UNQ5815/PRO19632Q6UWF5 114 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 Q8N8P6 123 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 PATE1Q8WXA2 126 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 MYH1P12882 1939 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 MYLKQ15746 1914 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 MYH13Q9UKX3 1938 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 DISP1Q96F81 1524 aa2.2□□□□□ -2.06
SCFD1-211ENST00000554437 NCKAP5O14513 1909 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 KIDINS220Q9ULH0 1771 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 H3BRM9 83 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 IL7P13232 177 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 S100A7L2Q5SY68 101 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 SLC48A1Q6P1K1 146 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 V9GYS6 101 aa2.19□□□□□ -2.06
SCFD1-211ENST00000554437 HELZP42694 1942 aaKnown RBP2.19□□□□□ -2.06
SCFD1-211ENST00000554437 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-211ENST00000554437 TMEM30CPA0ZSE6 113 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 SLC25A6P12236 298 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 CBLN1P23435 193 aa2.18□□□□□ -2.06
SCFD1-211ENST00000554437 UBE2G1P62253 170 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms