RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RHOHQ15669 191 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 TMEM183BQ1AE95 376 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 MUC21Q5SSG8 566 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 TMEM183AQ8IXX5 376 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 DNAJC30Q96LL9 226 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 C2orf50Q96LR7 162 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 SCGB3A2Q96PL1 93 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 SH3BGRL3Q9H299 93 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 ZNF492Q9P255 531 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 PRELID1Q9Y255 219 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 TRBV19A0A075B6N1 114 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 TRBV6-4A0A1B0GX49 114 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 FNDC10F2Z333 226 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 COX7A2P2O60397 106 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 OR10J4P0C629 311 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 SEC11BP0C7V7 166 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 HIST1H1EP10412 219 aaKnown RBP4.33□□□□□ -1.72
ATXN3-224ENST00000554040 UBE2MP61081 183 aaKnown RBP4.33□□□□□ -1.72
ATXN3-224ENST00000554040 RRAS2P62070 204 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-224ENST00000554040 SSBP1Q04837 148 aaKnown RBP4.33□□□□□ -1.72
ATXN3-224ENST00000554040 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 SDIM1Q6ZPB5 146 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 C9orf163Q8N9P6 203 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 RAB2BQ8WUD1 216 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 C15orf40Q8WUR7 153 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 PRRT1Q99946 306 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 RAB26Q9ULW5 256 aa4.33□□□□□ -1.72
ATXN3-224ENST00000554040 IGKV2-40A0A087WW87 121 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-224ENST00000554040 TRBV7-9A0A0J9YWB2 115 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 FBLL1A6NHQ2 334 aaKnown RBP4.32□□□□□ -1.72
ATXN3-224ENST00000554040 AGPAT2O15120 278 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 CIDEAO60543 219 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 NDUFB4O95168 129 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 IGKV2D-40P01614 121 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-224ENST00000554040 AKAIN1P0CW23 69 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 RAB31Q13636 194 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
ATXN3-224ENST00000554040 ZNF266Q14584 549 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 NEDD8Q15843 81 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 ATRAIDQ6UW56 229 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 IZUMO2Q6UXV1 221 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 DPPA3Q6W0C5 159 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 ZNF546Q86UE3 836 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 CLVS1Q8IUQ0 354 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-224ENST00000554040 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 UBE2WQ96B02 151 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 ZC2HC1AQ96GY0 325 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 VCX3BQ9H321 246 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 OR51M1Q9H341 326 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 PSENENQ9NZ42 101 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 EXTL2Q9UBQ6 330 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 RABL2BQ9UNT1 228 aa4.32□□□□□ -1.72
ATXN3-224ENST00000554040 PRYO14603 147 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 GNRH2O43555 120 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 HOXB5P09067 269 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 ZNF138P52744 262 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 PDE6HQ13956 83 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 Q6AWC8 147 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 WDR73Q6P4I2 378 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 TMEM14EPQ6UXP3 125 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 OR10G9Q8NGN4 311 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 CCDC59Q9P031 241 aaKnown RBP4.31□□□□□ -1.72
ATXN3-224ENST00000554040 SCP2D1Q9UJQ7 156 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 TIMM9Q9Y5J7 89 aa4.31□□□□□ -1.72
ATXN3-224ENST00000554040 A0A087WWC5 75 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 IGHV3-73A0A0B4J1V6 119 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 PRSS1P07477 247 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 METTL15P1P0C7V9 234 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 MRPS10P82664 201 aaKnown RBP4.3□□□□□ -1.72
ATXN3-224ENST00000554040 Q0VG73 95 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 Q6ZRG5 221 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 NIT1Q86X76 327 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 C12orf45Q8N5I9 185 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-224ENST00000554040 OR1L4Q8NGR5 311 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 DPH3Q96FX2 82 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 SMIM8Q96KF7 97 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 MGST2Q99735 147 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 TMEM14CQ9P0S9 112 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 URGCP-MRPS24S4R325 110 aa4.3□□□□□ -1.72
ATXN3-224ENST00000554040 A0A087WYN8 130 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 C5orf51A6NDU8 294 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 PHOX2AO14813 284 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 LINC00694P0DN24 101 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 MGST1P10620 155 aaKnown RBP4.29□□□□□ -1.72
ATXN3-224ENST00000554040 INPP1P49441 399 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 NCS1P62166 190 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 RPL19P84098 196 aaKnown RBP4.29□□□□□ -1.72
ATXN3-224ENST00000554040 ARL16Q0P5N6 197 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 ELOBQ15370 118 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 TMEM128Q5BJH2 165 aa4.29□□□□□ -1.72
ATXN3-224ENST00000554040 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms