RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 URGCP-MRPS24S4R325 110 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 A8MZ25 164 aa8.01□□□□□ -1.13
PABPN1-203ENST00000553960 ANXA2RQ3ZCQ2 193 aa8.01□□□□□ -1.13
PABPN1-203ENST00000553960 COA6Q5JTJ3 125 aaKnown RBP8.01□□□□□ -1.13
PABPN1-203ENST00000553960 ACTL10Q5JWF8 245 aa8.01□□□□□ -1.13
PABPN1-203ENST00000553960 C12orf54Q6X4T0 127 aa8.01□□□□□ -1.13
PABPN1-203ENST00000553960 C1QTNF4Q9BXJ3 329 aa8.01□□□□□ -1.13
PABPN1-203ENST00000553960 KIR2DL5BA0A0G2JN68 375 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 KIR2DL5BA0A0G2JPC4 375 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 CD33P20138 364 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 TFPI2P48307 235 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 CACNG7P62955 275 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 HBBP68871 147 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 RIGQ13278 110 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 KRTAP21-3Q3LHN1 58 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 PRR31Q5SQ13 230 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 GFI1BQ5VTD9 330 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 KIR2DL5AQ8N109 375 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 KIR2DL5BQ8NHK3 375 aa8□□□□□ -1.13
PABPN1-203ENST00000553960 RBMY1BA6NDE4 496 aaKnown RBP7.99□□□□□ -1.13
PABPN1-203ENST00000553960 RBMY1EA6NEQ0 496 aaKnown RBP7.99□□□□□ -1.13
PABPN1-203ENST00000553960 C1orf196B1AJZ1 125 aa7.99□□□□□ -1.13
PABPN1-203ENST00000553960 ORM1P02763 201 aa7.99□□□□□ -1.13
PABPN1-203ENST00000553960 RBMY1DP0C7P1 496 aaKnown RBP7.99□□□□□ -1.13
PABPN1-203ENST00000553960 ZNF705DP0CH99 300 aaPredicted RBP7.99□□□□□ -1.13
PABPN1-203ENST00000553960 ZNF705BP0CI00 300 aaPredicted RBP7.99□□□□□ -1.13
PABPN1-203ENST00000553960 HIST2H2BDQ6DRA6 164 aa7.99□□□□□ -1.13
PABPN1-203ENST00000553960 TMEM136Q6ZRR5 245 aa7.99□□□□□ -1.13
PABPN1-203ENST00000553960 FER1L6-AS1Q8NA97 138 aa7.99□□□□□ -1.13
PABPN1-203ENST00000553960 CA1P00915 261 aaPredicted RBP7.98□□□□□ -1.13
PABPN1-203ENST00000553960 RPS10P46783 165 aaKnown RBP7.98□□□□□ -1.13
PABPN1-203ENST00000553960 DEFB1P60022 68 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 RAB5BP61020 215 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 STHQ8IWL8 128 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 Q8N1Y9 231 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 DEFB125Q8N687 156 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
PABPN1-203ENST00000553960 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 IGHV1OR15-1A0A075B7D0 117 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 KNCNA6PVL3 124 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 CD7P09564 240 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 GIG44P09565 113 aaPredicted RBP7.97□□□□□ -1.13
PABPN1-203ENST00000553960 RNASE3P12724 160 aaKnown RBP7.97□□□□□ -1.13
PABPN1-203ENST00000553960 RNASE4P34096 147 aaKnown RBP7.97□□□□□ -1.13
PABPN1-203ENST00000553960 LYZL1Q6UWQ5 148 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 FAM159AQ6UWV7 190 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 CSNK1G2-AS1Q8NCQ2 148 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 BORCS7Q96B45 105 aa7.97□□□□□ -1.13
PABPN1-203ENST00000553960 INSP01308 110 aa7.96□□□□□ -1.14
PABPN1-203ENST00000553960 TRGC2P03986 189 aa7.96□□□□□ -1.14
PABPN1-203ENST00000553960 ASIPP42127 132 aa7.96□□□□□ -1.14
PABPN1-203ENST00000553960 IGHV3-16A0A0C4DH30 117 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 UBE2CO00762 179 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BKO60814 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 PPBPP02775 128 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BJP06899 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 ARMS2P0C7Q2 107 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BOP23527 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BBP33778 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BDP58876 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BCP62807 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 Q0VG73 95 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 KIR3DS1Q14943 382 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST2H2BEQ16778 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 SPINK13Q1W4C9 94 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.95□□□□□ -1.14
PABPN1-203ENST00000553960 ZNF705AQ6ZN79 300 aaPredicted RBP7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BHQ93079 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BNQ99877 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 HIST1H2BMQ99879 126 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 SPXQ9BT56 116 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 LAMTOR2Q9Y2Q5 125 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 TRAPPC1Q9Y5R8 145 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 U3KQK5 164 aa7.95□□□□□ -1.14
PABPN1-203ENST00000553960 MUC4Q99102 2169 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 TRAV12-3A0A0B4J271 114 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 PRSS47A8MTI9 375 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 M0R2Z0 102 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 TCL1AP56279 114 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 OR10J3Q5JRS4 329 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 FAM104BQ5XKR9 115 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 SPATA3Q8NHX4 192 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 IL17DQ8TAD2 202 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 PACRGQ96M98 296 aaPredicted RBP7.94□□□□□ -1.14
PABPN1-203ENST00000553960 EDA2RQ9HAV5 297 aa7.94□□□□□ -1.14
PABPN1-203ENST00000553960 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 SNURFLB1AK76 121 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 RBMY1A1P0DJD3 496 aaKnown RBP7.93□□□□□ -1.14
PABPN1-203ENST00000553960 RBMY1CP0DJD4 496 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 GZMBP10144 247 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 ESDP10768 282 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 NTF3P20783 257 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 RIPPLY3P57055 190 aa7.93□□□□□ -1.14
PABPN1-203ENST00000553960 RBMY1FQ15415 496 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms