RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 Q8N8P6 123 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 AMELYQ99218 206 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 MGST2Q99735 147 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 LINC00574Q9H8X3 128 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 NDUFB11Q9NX14 153 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 S4R3C0 116 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 TCHHQ07283 1943 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 SCN11AQ9UI33 1791 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 MON2Q7Z3U7 1717 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 LAMC1P11047 1609 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 CLASP1Q7Z460 1538 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 BLMP54132 1417 aaPredicted RBP2.28□□□□□ -2.04
TDP1-207ENST00000553617 IGKV2D-24A0A075B6R9 120 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 IGHV1-24A0A0C4DH33 117 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 C7orf77A4D0Y5 90 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 E7EQL1 145 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 J3QLW9 94 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 LECT2O14960 151 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 CREBL2O60519 120 aaPredicted RBP2.28□□□□□ -2.04
TDP1-207ENST00000553617 LY6HO94772 140 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 SIX6O95475 246 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 IGHV1-46P01743 117 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 PIRTP0C851 137 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 PIPP12273 146 aaPredicted RBP2.28□□□□□ -2.04
TDP1-207ENST00000553617 SUPT4H1P63272 117 aaKnown RBP2.28□□□□□ -2.04
TDP1-207ENST00000553617 CCL8P80075 99 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
TDP1-207ENST00000553617 WFDC2Q14508 124 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 ZNF345Q14585 488 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 HMGN2P46Q86SG4 172 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 MYOZ3Q8TDC0 251 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 AQP3Q92482 292 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 RETNLBQ9BQ08 111 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 SMDT1Q9H4I9 107 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 MICAL3Q7RTP6 2002 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 STRCQ7RTU9 1775 aa2.28□□□□□ -2.04
TDP1-207ENST00000553617 PLA2R1Q13018 1463 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 TRBV24-1A0A075B6N3 115 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 TRAV14DV4A0A0A6YYC5 116 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 IGHV3-73A0A0B4J1V6 119 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 LOC107984156A0A0G2JMH3 177 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 H3BMM0 161 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 SYS1-DBNDD2H3BUS1 97 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 K7EM74 188 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 NUPR1O60356 82 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 CCKP06307 115 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 NFYAP23511 347 aaPredicted RBP2.27□□□□□ -2.05
TDP1-207ENST00000553617 KRTDAPP60985 99 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 RBM3P98179 157 aaKnown RBP2.27□□□□□ -2.05
TDP1-207ENST00000553617 NMSQ5H8A3 153 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 ARL17AQ8IVW1 177 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 MIR7-3HGQ8N6C7 128 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 TMEM105Q8N8V8 129 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 ST20-AS1Q8NBB2 130 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 UBE2WQ96B02 151 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 LINC00167Q96N53 147 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 CST11Q9H112 138 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 CYTL1Q9NRR1 136 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 RGPD3A6NKT7 1758 aaPredicted RBP2.27□□□□□ -2.05
TDP1-207ENST00000553617 PREX2Q70Z35 1606 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 SAMD9Q5K651 1589 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 ABCC2Q92887 1545 aa2.27□□□□□ -2.05
TDP1-207ENST00000553617 NRXN1Q9ULB1 1477 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 SHANK2Q9UPX8 1470 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 IGLV4-60A0A075B6I1 120 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 A0A087WWC5 75 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 PIGBOS1A0A0B4J2F0 54 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 MUC21A0A140T8X8 626 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 A0A1W2PQD3 144 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 IBA57-AS1B1ANH7 110 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 H3BUT2 72 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 GNRH2O43555 120 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 WISP3O95389 354 aaPredicted RBP2.26□□□□□ -2.05
TDP1-207ENST00000553617 MSMBP08118 114 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 RPL28P46779 137 aaKnown RBP2.26□□□□□ -2.05
TDP1-207ENST00000553617 MOBPQ13875 183 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 PMCHL1Q16048 86 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 S100A7L2Q5SY68 101 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 SDIM1Q6ZPB5 146 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 COMMD6Q7Z4G1 85 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 SERP2Q8N6R1 65 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 C18orf32Q8TCD1 76 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 LINC00467Q9BRT7 94 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 SLC50A1Q9BRV3 221 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 CXCL16Q9H2A7 254 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 NHP2Q9NX24 153 aaKnown RBP2.26□□□□□ -2.05
TDP1-207ENST00000553617 U3KQK5 164 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 IQGAP3Q86VI3 1631 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 PLXNC1O60486 1568 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 ARHGEF12Q9NZN5 1544 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 MAP2P11137 1827 aaKnown RBP2.26□□□□□ -2.05
TDP1-207ENST00000553617 NUMA1Q14980 2115 aa2.26□□□□□ -2.05
TDP1-207ENST00000553617 SCN3AQ9NY46 2000 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 PPRC1Q5VV67 1664 aaKnown RBP2.25□□□□□ -2.05
TDP1-207ENST00000553617 DIDO1Q9BTC0 2240 aaKnown RBP2.25□□□□□ -2.05
TDP1-207ENST00000553617 KIF14Q15058 1648 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 MADDQ8WXG6 1647 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 PRR14LQ5THK1 2151 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms