RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 C11orf21Q9P2W6 132 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 S4R3C0 116 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 FREM2Q5SZK8 3169 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 URB1O60287 2271 aaKnown RBP4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 CHD8Q9HCK8 2581 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 IGHV4OR15-8A0A075B7B6 117 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 A0A087WW49 117 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 MYMXA0A1B0GTQ4 84 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 IGLL5B9A064 214 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 TMEM238C9JI98 176 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 NDUFA4O00483 81 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 SOCS3O14543 225 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 GAS8-AS1O95177 125 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 TRGV3P03979 118 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 ASIPP42127 132 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 SUMO2P61956 95 aaKnown RBP4□□□□□ -1.77
TMEM55B-204ENST00000553602 PRB3Q04118 309 aaPredicted RBP4□□□□□ -1.77
TMEM55B-204ENST00000553602 ERCC8Q13216 396 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 RRN3P1Q2M238 152 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 SPANXN1Q5VSR9 72 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 ZFAND2AQ8N6M9 145 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 NEXN-AS1Q8NBZ9 246 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 ZNF479Q96JC4 524 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 ODF3Q96PU9 254 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 SPATA25Q9BR10 227 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 SPANXB1Q9NS25 103 aaPredicted RBP4□□□□□ -1.77
TMEM55B-204ENST00000553602 MOB4Q9Y3A3 225 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 SVILO95425 2214 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 FRYLO94915 3013 aa4□□□□□ -1.77
TMEM55B-204ENST00000553602 EPG5Q9HCE0 2579 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 TRAV40A0A0B4J280 105 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 NDUFS8O00217 210 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 NPFFO15130 113 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 IGHV3-23P01764 117 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 IGF1P05019 195 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 ZFP36P26651 326 aaKnown RBP3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 SAA4P35542 130 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 UBE2D1P51668 147 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 EFNA4P52798 201 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 FXYD7P58549 80 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 ADORA2A-AS1P86434 159 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 ATP5G2Q06055 141 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 KLRB1Q12918 225 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 ECSCRQ19T08 205 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 C12orf74Q32Q52 190 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 CLEC19AQ6UXS0 136 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 GTSCR1Q86UQ5 136 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 RNF182Q8N6D2 247 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 OR10J6PQ8NGY7 276 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 USMG5Q96IX5 58 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 NHP2Q9NX24 153 aaKnown RBP3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 PRO0461Q9UI25 63 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 UFC1Q9Y3C8 167 aa3.99□□□□□ -1.77
TMEM55B-204ENST00000553602 ICE1Q9Y2F5 2266 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 APC2O95996 2303 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 TRAV41A0A0B4J266 112 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 TRBV6-5A0A0K0K1A5 114 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 TEX48A0A1B0GUV7 120 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 H3BVH4 76 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 M0QXV9 152 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 CCL21O00585 134 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 COX6B1P14854 86 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 RIPPLY3P57055 190 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 LMO4P61968 165 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 CD300EQ496F6 205 aaPredicted RBP3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 XP32Q5T750 250 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 IGFL4Q6B9Z1 124 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 GPHB5Q86YW7 130 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 RASL10AQ92737 203 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 RAB37Q96AX2 223 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 TMEM141Q96I45 108 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 SCGB3A1Q96QR1 104 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 HIST1H4GQ99525 98 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 TIMM17AQ99595 171 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 TMEM160Q9NX00 188 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 PLA2G2DQ9UNK4 145 aa3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 CHTOPQ9Y3Y2 248 aaKnown RBP3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 ANKRD11Q6UB99 2663 aaPredicted RBP3.98□□□□□ -1.77
TMEM55B-204ENST00000553602 PKDREJQ9NTG1 2253 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 IGF2RP11717 2491 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 TRBV20-1A0A075B6N2 111 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 C11orf86A6NJI1 115 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 KLLNB2CW77 178 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 H3BMG7 143 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 K7EMT4 169 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 K7ERJ3 54 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 CIDEAO60543 219 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 LY6HO94772 140 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 LGALS1P09382 135 aaKnown RBP3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 PPIFP30405 207 aaKnown RBP3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 ARL3P36405 182 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 HERVK_113P61574 105 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 PRR9Q5T870 116 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 MORN3Q6PF18 240 aaPredicted RBP3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 C2orf66Q6UXQ4 117 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 MAPKAPK5-AS1Q8N8E1 139 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 BAALCQ8WXS3 180 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms