RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CD300EQ496F6 205 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-230ENST00000552960 CEND1Q8N111 149 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
HDAC7-230ENST00000552960 J3QR89 54 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 SCGB2A2Q13296 93 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 C5orf64Q2M2E5 130 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 Q6ZQT7 251 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 CFHR4Q92496 578 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 SPAG8Q99932 426 aaPredicted RBP9.56□□□□□ -0.88
HDAC7-230ENST00000552960 SMAD5-AS1Q9Y6J3 95 aa9.56□□□□□ -0.88
HDAC7-230ENST00000552960 ECSCRQ19T08 205 aa9.55□□□□□ -0.88
HDAC7-230ENST00000552960 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
HDAC7-230ENST00000552960 ZNF469Q96JG9 3925 aaPredicted RBP9.55□□□□□ -0.88
HDAC7-230ENST00000552960 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
HDAC7-230ENST00000552960 A0A1B0GWB2 263 aa9.55□□□□□ -0.88
HDAC7-230ENST00000552960 CCDC144NLQ6NUI1 221 aa9.55□□□□□ -0.88
HDAC7-230ENST00000552960 HIF1ANQ9NWT6 349 aa9.55□□□□□ -0.88
HDAC7-230ENST00000552960 UBR5O95071 2799 aaPredicted RBP9.54□□□□□ -0.88
HDAC7-230ENST00000552960 IGLV11-55A0A075B6I3 123 aa9.54□□□□□ -0.88
HDAC7-230ENST00000552960 IGLL5B9A064 214 aa9.54□□□□□ -0.88
HDAC7-230ENST00000552960 TTC9CQ8N5M4 171 aa9.54□□□□□ -0.88
HDAC7-230ENST00000552960 CYSLTR1Q9Y271 337 aa9.54□□□□□ -0.88
HDAC7-230ENST00000552960 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
HDAC7-230ENST00000552960 TENM4Q6N022 2769 aa9.53□□□□□ -0.88
HDAC7-230ENST00000552960 ABCA2Q9BZC7 2435 aa9.53□□□□□ -0.88
HDAC7-230ENST00000552960 ATP5LO75964 103 aa9.53□□□□□ -0.88
HDAC7-230ENST00000552960 IGHG4P01861 327 aa9.53□□□□□ -0.88
HDAC7-230ENST00000552960 CTSGP08311 255 aa9.53□□□□□ -0.88
HDAC7-230ENST00000552960 C12orf74Q32Q52 190 aa9.53□□□□□ -0.88
HDAC7-230ENST00000552960 SPANXB1Q9NS25 103 aaPredicted RBP9.52□□□□□ -0.88
HDAC7-230ENST00000552960 CLEC3BP05452 202 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 LAGE3Q14657 143 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 FOXI2Q6ZQN5 318 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 ZNF575Q86XF7 245 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 Q8N8P6 123 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 RNF5Q99942 180 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 C20orf78Q9BR46 151 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 HIGD1BQ9P298 99 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 C11orf21Q9P2W6 132 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 LY6LH3BQJ8 138 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 H3BVH4 76 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 NRGNQ92686 78 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 TIMD4Q96H15 378 aa9.52□□□□□ -0.89
HDAC7-230ENST00000552960 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
HDAC7-230ENST00000552960 M0R381 172 aa9.51□□□□□ -0.89
HDAC7-230ENST00000552960 C15orf32Q32M92 178 aa9.51□□□□□ -0.89
HDAC7-230ENST00000552960 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
HDAC7-230ENST00000552960 SRSF8Q9BRL6 282 aaKnown RBP9.51□□□□□ -0.89
HDAC7-230ENST00000552960 CRYBA4P53673 196 aa9.51□□□□□ -0.89
HDAC7-230ENST00000552960 TMEM78Q5T7P6 136 aa9.51□□□□□ -0.89
HDAC7-230ENST00000552960 AGPAT4-IT1Q9H0P7 198 aa9.51□□□□□ -0.89
HDAC7-230ENST00000552960 ACANP16112 2415 aa9.51□□□□□ -0.89
HDAC7-230ENST00000552960 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 TGFAP01135 160 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 OR11H12B2RN74 326 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 ZFP36P26651 326 aaKnown RBP9.5□□□□□ -0.89
HDAC7-230ENST00000552960 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 OR11H1Q8NG94 326 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 OR11H2Q8NH07 326 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 TM2D2Q9BX73 214 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 MTORP42345 2549 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 E9PLD3 99 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 NDUFS8O00217 210 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 ZNF418Q8TF45 676 aaPredicted RBP9.5□□□□□ -0.89
HDAC7-230ENST00000552960 SMPXQ9UHP9 88 aa9.5□□□□□ -0.89
HDAC7-230ENST00000552960 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
HDAC7-230ENST00000552960 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
HDAC7-230ENST00000552960 F8W1H4 67 aa9.49□□□□□ -0.89
HDAC7-230ENST00000552960 EMP1P54849 157 aa9.49□□□□□ -0.89
HDAC7-230ENST00000552960 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
HDAC7-230ENST00000552960 APOMO95445 188 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 SRSF1Q07955 248 aaKnown RBP eCLIP9.48□□□□□ -0.899e-8■□□□□ 9.9
HDAC7-230ENST00000552960 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC7-230ENST00000552960 MRPL16Q9NX20 251 aaKnown RBP9.48□□□□□ -0.89
HDAC7-230ENST00000552960 A0A087WX48 190 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 MGPP08493 103 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 S100A4P26447 101 aaKnown RBP9.48□□□□□ -0.89
HDAC7-230ENST00000552960 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 ZNF502Q8TBZ5 544 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
HDAC7-230ENST00000552960 WNK1Q9H4A3 2382 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 DEFB1P60022 68 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 NPBQ8NG41 125 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 PTH2Q96A98 100 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 SORL1Q92673 2214 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 G3V318 75 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 LINC00527Q9UJ94 153 aa9.47□□□□□ -0.89
HDAC7-230ENST00000552960 IGLV2-18A0A075B6J9 118 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 IGF1P05019 195 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 RRN3P1Q2M238 152 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms